RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ZBTB33Q86T24 672 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 SYCE1Q8N0S2 351 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 U2AF1L4Q8WU68 220 aaKnown RBP12.51□□□□□ -0.41
PRKCB-207ENST00000486868 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 RFFLQ8WZ73 363 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 ANKRD7Q92527 254 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 TATDN2Q93075 761 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 ANKRD36BP1Q96IX9 119 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 MTG1Q9BT17 334 aaPredicted RBP12.51□□□□□ -0.41
PRKCB-207ENST00000486868 CARD6Q9BX69 1037 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 PDZD7Q9H5P4 517 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 VRTNQ9H8Y1 702 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 SETD4Q9NVD3 440 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 SALL4Q9UJQ4 1053 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 SNX12Q9UMY4 172 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 DERAQ9Y315 318 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 C2CD2Q9Y426 696 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 CAPN6Q9Y6Q1 641 aa12.51□□□□□ -0.41
PRKCB-207ENST00000486868 SRCAPQ6ZRS2 3230 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 GPR25O00155 361 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 B4GALT5O43286 388 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 TSPAN1O60635 241 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 PHACTR2O75167 634 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 LRRN2O75325 713 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 ERLIN2O94905 339 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 STAU1O95793 577 aaKnown RBP12.5□□□□□ -0.41
PRKCB-207ENST00000486868 TNNC2P02585 160 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 VTNP04004 478 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 CYP2C9P11712 490 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 CYP11B1P15538 503 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 ARF4P18085 180 aaPredicted RBP12.5□□□□□ -0.41
PRKCB-207ENST00000486868 ACO1P21399 889 aaKnown RBP12.5□□□□□ -0.41
PRKCB-207ENST00000486868 ATICP31939 592 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 TNFSF9P41273 254 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 GRM5P41594 1212 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 FLT3LGP49771 235 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 PDE6CP51160 858 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 GALCP54803 685 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 YWHAEP62258 255 aaKnown RBP12.5□□□□□ -0.41
PRKCB-207ENST00000486868 NOP14P78316 857 aaKnown RBP12.5□□□□□ -0.41
PRKCB-207ENST00000486868 SP3Q02447 781 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 TMEM132AQ24JP5 1023 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 CYP4F22Q6NT55 531 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 RPAINQ86UA6 219 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 SESTD1Q86VW0 696 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 GLYCTKQ8IVS8 523 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 RHOT2Q8IXI1 618 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 UBR7Q8N806 425 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 OR5B17Q8NGF7 314 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 CTNNBL1Q8WYA6 563 aaPredicted RBP12.5□□□□□ -0.41
PRKCB-207ENST00000486868 DDX1Q92499 740 aaKnown RBP12.5□□□□□ -0.41
PRKCB-207ENST00000486868 UBXN4Q92575 508 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 RABGGTAQ92696 567 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 GOLGA1Q92805 767 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 KAT5Q92993 513 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 ZIC5Q96T25 663 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 TFR2Q9UP52 801 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 HYOU1Q9Y4L1 999 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 PTPRJQ12913 1337 aa12.5□□□□□ -0.41
PRKCB-207ENST00000486868 MROH7Q68CQ1 1323 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 C17orf102A2RUQ5 167 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 CTAGE15A4D2H0 777 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 CYP26A1O43174 497 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 MTA2O94776 668 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 SGPL1O95470 568 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 ATP1A1P05023 1023 aaKnown RBP12.49□□□□□ -0.41
PRKCB-207ENST00000486868 MYL3P08590 195 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 TMEM191BP0C7N4 346 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 CTAGE8P0CG41 777 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 STAG3L1P0CL83 205 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 PNMA6AP0CW24 399 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-207ENST00000486868 DARSP14868 501 aaKnown RBP12.49□□□□□ -0.41
PRKCB-207ENST00000486868 CHRNB2P17787 502 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 EIF4BP23588 611 aaKnown RBP12.49□□□□□ -0.41
PRKCB-207ENST00000486868 CST5P28325 142 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-207ENST00000486868 MAP2K2P36507 400 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 CRYBB1P53674 252 aaPredicted RBP12.49□□□□□ -0.41
PRKCB-207ENST00000486868 FMO1Q01740 532 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 TRPC3Q13507 836 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 MEI1Q5TIA1 1274 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 CTAGE6Q86UF2 777 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 CTAGE4Q8IX94 777 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 THNSL1Q8IYQ7 743 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 RPUSD2Q8IZ73 545 aaKnown RBP12.49□□□□□ -0.41
PRKCB-207ENST00000486868 TTC39CQ8N584 583 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 GPR161Q8N6U8 529 aaKnown RBP12.49□□□□□ -0.41
PRKCB-207ENST00000486868 TRPV1Q8NER1 839 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 TPCN2Q8NHX9 752 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 TRIB2Q92519 343 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 CAPNS2Q96L46 248 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 PACSIN1Q9BY11 444 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 NIF3L1Q9GZT8 377 aa12.49□□□□□ -0.41
PRKCB-207ENST00000486868 APOBEC3GQ9HC16 384 aaKnown RBP12.49□□□□□ -0.41
PRKCB-207ENST00000486868 RARBP10826 455 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 HARSP12081 509 aaKnown RBP12.48□□□□□ -0.41
PRKCB-207ENST00000486868 HOXA11P31270 313 aaPredicted RBP12.48□□□□□ -0.41
PRKCB-207ENST00000486868 ZNF132P52740 706 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 NAP1L1P55209 391 aaKnown RBP12.48□□□□□ -0.41
PRKCB-207ENST00000486868 CHMP4BP1P59074 171 aa12.48□□□□□ -0.41
PRKCB-207ENST00000486868 NOTUMQ6P988 496 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms