RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 MICAL3Q7RTP6 2002 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 OTOP2Q7RTS6 562 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 RNF169Q8NCN4 708 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 ANKRD20A12PQ8NF67 263 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 OR5B17Q8NGF7 314 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 CXorf38Q8TB03 319 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 RSPH1Q8WYR4 309 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 ZNF516Q92618 1163 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 TOP1MTQ969P6 601 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 FAM84AQ96KN4 292 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 PPP1R10Q96QC0 940 aaKnown RBP10.37□□□□□ -0.75
MCF2L-227ENST00000486806 GAD1Q99259 594 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 POP1Q99575 1024 aaKnown RBP10.37□□□□□ -0.75
MCF2L-227ENST00000486806 LBHD1Q9BQE6 289 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-227ENST00000486806 MTMR12Q9C0I1 747 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 TMEM117Q9H0C3 514 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 NDST4Q9H3R1 872 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 GRPEL1Q9HAV7 217 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 TMEM8AQ9HCN3 771 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 RNF216Q9NWF9 866 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-227ENST00000486806 KLK14Q9P0G3 267 aa10.37□□□□□ -0.75
MCF2L-227ENST00000486806 P4HA2O15460 535 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 HOXA2O43364 376 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 STX10O60499 249 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 N4BP1O75113 896 aaKnown RBP10.36□□□□□ -0.75
MCF2L-227ENST00000486806 SERPINC1P01008 464 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 FGBP02675 491 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 AMHP03971 560 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 C4BPAP04003 597 aaKnown RBP10.36□□□□□ -0.75
MCF2L-227ENST00000486806 TNNI1P19237 187 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 CYP3A5P20815 502 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 GCLMP48507 274 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 FMO5P49326 533 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 MXI1P50539 228 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 SCNN1GP51170 649 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 AP3M2P53677 418 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 GRIK3Q13003 919 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 TMEM132DQ14C87 1099 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 TDRD10Q5VZ19 366 aaKnown RBP10.36□□□□□ -0.75
MCF2L-227ENST00000486806 KRT39Q6A163 491 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 GLB1LQ6UWU2 654 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 SV2AQ7L0J3 742 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 CREBRFQ8IUR6 639 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 C1orf127Q8N9H9 656 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 HELQQ8TDG4 1101 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 FAM212AQ96EL1 285 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 KIF12Q96FN5 646 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 NAP1L5Q96NT1 182 aaPredicted RBP10.36□□□□□ -0.75
MCF2L-227ENST00000486806 CASD1Q96PB1 797 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 RPS6KC1Q96S38 1066 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 VPS16Q9H269 839 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 RTN4Q9NQC3 1192 aaKnown RBP10.36□□□□□ -0.75
MCF2L-227ENST00000486806 MIOSQ9NXC5 875 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 CXXC1Q9P0U4 656 aaPredicted RBP10.36□□□□□ -0.75
MCF2L-227ENST00000486806 TUBGCP4Q9UGJ1 667 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 COQ4Q9Y3A0 265 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 PCDHB7Q9Y5E2 793 aa10.36□□□□□ -0.75
MCF2L-227ENST00000486806 GTPBP10A4D1E9 387 aaKnown RBP10.35□□□□□ -0.75
MCF2L-227ENST00000486806 DGKIO75912 1065 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 VNN1O95497 513 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 TMEM191BP0C7N4 346 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 IBSPP21815 317 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-227ENST00000486806 PBX1P40424 430 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 KCNJ6P48051 423 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 GATMP50440 423 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 UBASH3AP57075 661 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 TFAMQ00059 246 aaKnown RBP10.35□□□□□ -0.75
MCF2L-227ENST00000486806 MYL7Q01449 175 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 SOX4Q06945 474 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-227ENST00000486806 DSC1Q08554 894 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 NR1I3Q14994 352 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 DUOXA2Q1HG44 320 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 EPC2Q52LR7 807 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 NOMO2Q5JPE7 1267 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 TRAPPC11Q7Z392 1133 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 TMEM130Q8N3G9 435 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 TAS1R2Q8TE23 839 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 C18orf25Q96B23 403 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-227ENST00000486806 ZNF689Q96CS4 500 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-227ENST00000486806 ANKRD36BP1Q96IX9 119 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 GDF15Q99988 308 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 XPO4Q9C0E2 1151 aaKnown RBP10.35□□□□□ -0.75
MCF2L-227ENST00000486806 SLC38A7Q9NVC3 462 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 TBC1D13Q9NVG8 400 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 IFNKQ9P0W0 207 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 SIX4Q9UIU6 781 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 ITGA11Q9UKX5 1188 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 LRFN2Q9ULH4 789 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 UBQLN1Q9UMX0 589 aaKnown RBP10.35□□□□□ -0.75
MCF2L-227ENST00000486806 INPP5FQ9Y2H2 1132 aa10.35□□□□□ -0.75
MCF2L-227ENST00000486806 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-227ENST00000486806 ANK1P16157 1881 aa10.34□□□□□ -0.75
MCF2L-227ENST00000486806 ANO9A1A5B4 782 aa10.34□□□□□ -0.75
MCF2L-227ENST00000486806 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
MCF2L-227ENST00000486806 H0YGN5 161 aa10.34□□□□□ -0.75
MCF2L-227ENST00000486806 TEX33O43247 280 aa10.34□□□□□ -0.75
MCF2L-227ENST00000486806 XPOTO43592 962 aaKnown RBP10.34□□□□□ -0.75
MCF2L-227ENST00000486806 B4GALT3O60512 393 aa10.34□□□□□ -0.75
MCF2L-227ENST00000486806 GJB5O95377 273 aa10.34□□□□□ -0.75
MCF2L-227ENST00000486806 POMCP01189 267 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms