RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.07□□□□□ -0.16
CHMP3-208ENST00000486404 SFR1Q86XK3 245 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 RNF135Q8IUD6 432 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 GPR65Q8IYL9 337 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 PDILTQ8N807 584 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 LINC00301Q8NCQ3 95 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 KHSRPQ92945 711 aaKnown RBP eCLIP14.07□□□□□ -0.165e-6■■■■□ 19.6
CHMP3-208ENST00000486404 DDX27Q96GQ7 796 aaKnown RBP14.07□□□□□ -0.16
CHMP3-208ENST00000486404 MSTO1Q9BUK6 570 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 RXFP1Q9HBX9 757 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 CHST7Q9NS84 486 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 CNTN3Q9P232 1028 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 MUTYHQ9UIF7 546 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 CDH22Q9UJ99 828 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 TCHHQ07283 1943 aa14.07□□□□□ -0.16
CHMP3-208ENST00000486404 FAM86C2PA6NEL3 165 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 LOC730098B7Z3J9 87 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 PI4K2BG5E9Z4 385 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 TMEM189-UBE2V1I3L0A0 370 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 PODXLO00592 558 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 LILRB3O75022 631 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 PPP6R2O75170 966 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 EFEMP2O95967 443 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 CLTAP09496 248 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 CXCL8P10145 99 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 IDEP14735 1019 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 KCNE1P15382 129 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 RPL17P18621 184 aaKnown RBP14.06□□□□□ -0.16
CHMP3-208ENST00000486404 NMT1P30419 496 aaKnown RBP14.06□□□□□ -0.16
CHMP3-208ENST00000486404 SEZ6Q53EL9 994 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 DCLRE1AQ6PJP8 1040 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 PALB2Q86YC2 1186 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 MAP4K3Q8IVH8 894 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 TDRD5Q8NAT2 981 aaKnown RBP14.06□□□□□ -0.16
CHMP3-208ENST00000486404 KCNG4Q8TDN1 519 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 DDX12PQ92771 950 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 HVCN1Q96D96 273 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 PANK2Q9BZ23 570 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 POMKQ9H5K3 350 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 MRPL44Q9H9J2 332 aaKnown RBP14.06□□□□□ -0.16
CHMP3-208ENST00000486404 FNIP2Q9P278 1114 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 TFIP11Q9UBB9 837 aaKnown RBP14.06□□□□□ -0.16
CHMP3-208ENST00000486404 SEL1LQ9UBV2 794 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 NUB1Q9Y5A7 615 aa14.06□□□□□ -0.16
CHMP3-208ENST00000486404 OGTO15294 1046 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 CUTAO60888 179 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 MYBP10242 640 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 ME1P48163 572 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 UPP1Q16831 310 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 XKR4Q5GH76 650 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 LIN9Q5TKA1 542 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 CCDC149Q6ZUS6 474 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 PIK3R5Q8WYR1 880 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 KCNN1Q92952 543 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 LRRC27Q9C0I9 530 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 EXOC7Q9UPT5 735 aa14.05□□□□□ -0.16
CHMP3-208ENST00000486404 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.05□□□□□ -0.16
CHMP3-208ENST00000486404 TSC2P49815 1807 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 MYMKA6NI61 221 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 I3L4J1 428 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 TGM5O43548 720 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 XPOTO43592 962 aaKnown RBP14.04□□□□□ -0.16
CHMP3-208ENST00000486404 GCNT3O95395 438 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 PIGRP01833 764 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 SPATA31D3P0C874 917 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 MCM4P33991 863 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 GTF2BQ00403 316 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 SOX4Q06945 474 aaPredicted RBP14.04□□□□□ -0.16
CHMP3-208ENST00000486404 ZC2HC1CQ53FD0 456 aaPredicted RBP14.04□□□□□ -0.16
CHMP3-208ENST00000486404 KANK3Q6NY19 840 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 ALKAL1Q6UXT8 129 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 C15orf39Q6ZRI6 1047 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 SPATA31D4Q6ZUB0 917 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 C18orf25Q96B23 403 aaPredicted RBP14.04□□□□□ -0.16
CHMP3-208ENST00000486404 DHX58Q96C10 678 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 KIF12Q96FN5 646 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 ZMAT2Q96NC0 199 aaKnown RBP14.04□□□□□ -0.16
CHMP3-208ENST00000486404 CUEDC2Q9H467 287 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 ST6GALNAC4Q9H4F1 302 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 PLEKHA4Q9H4M7 779 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 RPF1Q9H9Y2 349 aaKnown RBP14.04□□□□□ -0.16
CHMP3-208ENST00000486404 PLEKHA5Q9HAU0 1116 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 PIDD1Q9HB75 910 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 TBC1D7Q9P0N9 293 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 TUBGCP4Q9UGJ1 667 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 CFAP45Q9UL16 551 aa14.04□□□□□ -0.16
CHMP3-208ENST00000486404 A0A087X0B3 334 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 FGFR3P22607 806 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 TKTP29401 623 aaKnown RBP14.03□□□□□ -0.16
CHMP3-208ENST00000486404 RPL9P32969 192 aaKnown RBP14.03□□□□□ -0.16
CHMP3-208ENST00000486404 TNFSF9P41273 254 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 BRCC3P46736 316 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 ALCAMQ13740 583 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 PKP1Q13835 747 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 SLC10A6Q3KNW5 377 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-208ENST00000486404 ATL3Q6DD88 541 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 SLFN12LQ6IEE8 588 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
CHMP3-208ENST00000486404 GPR149Q86SP6 731 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms