RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 RASIP1Q5U651 963 aa15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 CCDC127Q96BQ5 260 aa15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 TARS2Q9BW92 718 aaKnown RBP15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 NFKBIZQ9BYH8 718 aa15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 TSGA10Q9BZW7 698 aa15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 TMEM117Q9H0C3 514 aa15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 LUC7LQ9NQ29 371 aaKnown RBP15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 CXXC1Q9P0U4 656 aaPredicted RBP15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 DNAJC12Q9UKB3 198 aa15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 USP20Q9Y2K6 914 aa15.78■□□□□ 0.12
POLR2J3-204ENST00000486319 A0A0B4J269 797 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 LRRIQ3A6PVS8 624 aaPredicted RBP15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 ZBBXA8MT70 800 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 RIOK3O14730 519 aaKnown RBP15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 PRKCBP05771 671 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 CCDC172P0C7W6 258 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 FERP16591 822 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 PRKCIP41743 596 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 ARHGAP25P42331 645 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 VAV2P52735 878 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 GPNMBQ14956 572 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 MARCH8Q5T0T0 291 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 TAF2Q6P1X5 1199 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 LMO3Q8TAP4 145 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 JAKMIP2Q96AA8 810 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 MSTO1Q9BUK6 570 aa15.77■□□□□ 0.11
POLR2J3-204ENST00000486319 MBLAC1A4D2B0 266 aaPredicted RBP15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 RBAK-RBAKDNI3L0D1 243 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 CLDN3O15551 220 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 NBNO60934 754 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 CAND2O75155 1236 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 TOM1L1O75674 476 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 CLCN3P51790 818 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 ARID5AQ03989 594 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 KIF5AQ12840 1032 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 PSMD6Q15008 389 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 CCDC122Q5T0U0 273 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 TRAF7Q6Q0C0 670 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 MTHFD1LQ6UB35 978 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 IRF2BP2Q7Z5L9 587 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 RSPH3Q86UC2 560 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 LINC01465Q8N7H1 131 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 NLRP4Q96MN2 994 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 FNBP1Q96RU3 617 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 IFIH1Q9BYX4 1025 aaKnown RBP15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 ANKFY1Q9P2R3 1169 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 COQ4Q9Y3A0 265 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 PCDHA13Q9Y5I0 950 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 SLC4A7Q9Y6M7 1214 aa15.76■□□□□ 0.11
POLR2J3-204ENST00000486319 A0A0U1RQJ8 604 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 ACKR2O00590 384 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 ZNF263O14978 683 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 CTSHP09668 335 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 SOX5P35711 763 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 MAGEA1P43355 309 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 PHKA2P46019 1235 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 PTENP60484 403 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 CLDN10P78369 228 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 CYP27A1Q02318 531 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 SLC18A3Q16572 532 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 GJB7Q6PEY0 223 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 RUFY4Q6ZNE9 571 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 IFNLR1Q8IU57 520 aaPredicted RBP15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 ATRIPQ8WXE1 791 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 ACO2Q99798 780 aaKnown RBP15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 FZD8Q9H461 694 aa15.75■□□□□ 0.11
POLR2J3-204ENST00000486319 UQCRHLA0A096LP55 91 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 F8VZ95 297 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 SLC34A2O95436 690 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 CXCL10P02778 98 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 EDN1P05305 212 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 UQCRHP07919 91 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 ACOT2P49753 483 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 NLRP11P59045 1033 aaKnown RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 GFPT1Q06210 699 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 MBTPS1Q14703 1052 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 DRAP1Q14919 205 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 ZNF569Q5MCW4 686 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 C10orf76Q5T2E6 689 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 FAM109BQ6ICB4 259 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 PHLDB3Q6NSJ2 640 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 CRELD2Q6UXH1 353 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 RPAINQ86UA6 219 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 VPS36Q86VN1 386 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 DEFB123Q8N688 67 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 FBXL13Q8NEE6 735 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 DNAJB3Q8WWF6 145 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 ZBTB10Q96DT7 871 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 ZBTB45Q96K62 511 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 WDR24Q96S15 920 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 TCHPQ9BT92 498 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 IRX2Q9BZI1 471 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 HAPLN2Q9GZV7 340 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 PRMT7Q9NVM4 692 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 RBAKQ9NYW8 714 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 AJAP1Q9UKB5 411 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 GUCA1BQ9UMX6 200 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 ANK1P16157 1881 aa15.74■□□□□ 0.11
POLR2J3-204ENST00000486319 GRXCR1A8MXD5 290 aa15.73■□□□□ 0.11
POLR2J3-204ENST00000486319 INO80B-WBP1J3KQ70 363 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms