RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SSU72Q9NP77 194 aaKnown RBP7.66□□□□□ -1.18
SMC4-217ENST00000485867 MBNL3Q9NUK0 354 aaKnown RBP7.66□□□□□ -1.18
SMC4-217ENST00000485867 R4GN57 208 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 FRYLO94915 3013 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 ZFYVE26Q68DK2 2539 aa7.66□□□□□ -1.18
SMC4-217ENST00000485867 PATL2C9JE40 543 aaKnown RBP7.65□□□□□ -1.18
SMC4-217ENST00000485867 C8AP07357 584 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 RNASE1P07998 156 aaKnown RBP7.65□□□□□ -1.18
SMC4-217ENST00000485867 PDHBP11177 359 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 GNAT1P11488 350 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 HOXB8P17481 243 aaPredicted RBP7.65□□□□□ -1.18
SMC4-217ENST00000485867 UBA1P22314 1058 aaKnown RBP7.65□□□□□ -1.18
SMC4-217ENST00000485867 GATMP50440 423 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 ERVFC1P60507 584 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 RING1Q06587 406 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 ZNF543Q08ER8 600 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 FZD5Q13467 585 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 PPM1JQ5JR12 505 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 ARHGEF16Q5VV41 709 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 C2orf16Q68DN1 1984 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 CCDC171Q6TFL3 1326 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 ANKRD11Q6UB99 2663 aaPredicted RBP7.65□□□□□ -1.18
SMC4-217ENST00000485867 NPAS4Q8IUM7 802 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 FTSJ3Q8IY81 847 aaKnown RBP7.65□□□□□ -1.18
SMC4-217ENST00000485867 DCLK2Q8N568 766 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 KBTBD3Q8NAB2 608 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 RASGRP4Q8TDF6 673 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 LMBR1Q8WVP7 490 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 HRASLS5Q96KN8 279 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 TMEM47Q9BQJ4 181 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 RTP3Q9BQQ7 232 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 NACAP1Q9BZK3 213 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 CEP44Q9C0F1 390 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 NAPBQ9H115 298 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 PXMP2Q9NR77 195 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 SETD4Q9NVD3 440 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 PPM1HQ9ULR3 514 aa7.65□□□□□ -1.18
SMC4-217ENST00000485867 SUPT16HQ9Y5B9 1047 aaKnown RBP7.65□□□□□ -1.18
SMC4-217ENST00000485867 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.65□□□□□ -1.18
SMC4-217ENST00000485867 MIA3Q5JRA6 1907 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 ABCB11O95342 1321 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 BIN1O00499 593 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 RNF113AO15541 343 aaKnown RBP7.64□□□□□ -1.19
SMC4-217ENST00000485867 RAB11FIP3O75154 756 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 TOP1P11387 765 aaKnown RBP7.64□□□□□ -1.19
SMC4-217ENST00000485867 SP2Q02086 613 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 FBXO47Q5MNV8 452 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 PLPP4Q5VZY2 271 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 LLGL2Q6P1M3 1020 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 TSHZ1Q6ZSZ6 1077 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 UBE3DQ7Z6J8 389 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 ATG4DQ86TL0 474 aaPredicted RBP7.64□□□□□ -1.19
SMC4-217ENST00000485867 RTN4RL1Q86UN2 441 aaPredicted RBP7.64□□□□□ -1.19
SMC4-217ENST00000485867 ZDHHC14Q8IZN3 488 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 TDRD5Q8NAT2 981 aaKnown RBP7.64□□□□□ -1.19
SMC4-217ENST00000485867 NECTIN4Q96NY8 510 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 AGO3Q9H9G7 860 aaKnown RBP7.64□□□□□ -1.19
SMC4-217ENST00000485867 ERVK-5Q9HDB9 667 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 RALYQ9UKM9 306 aaKnown RBP7.64□□□□□ -1.19
SMC4-217ENST00000485867 DOCK8Q8NF50 2099 aa7.64□□□□□ -1.19
SMC4-217ENST00000485867 RANBP6O60518 1105 aaKnown RBP7.63□□□□□ -1.19
SMC4-217ENST00000485867 FBXO24O75426 580 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 FGF18O76093 207 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 ZFYP08048 801 aaPredicted RBP7.63□□□□□ -1.19
SMC4-217ENST00000485867 STAG3L1P0CL83 205 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 SNHG28P0DPA3 235 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 MTHFRP42898 656 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 ATXN1P54253 815 aaKnown RBP7.63□□□□□ -1.19
SMC4-217ENST00000485867 APOBRQ0VD83 1088 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 CDC37Q16543 378 aaPredicted RBP7.63□□□□□ -1.19
SMC4-217ENST00000485867 KCNV1Q6PIU1 500 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 RUFY4Q6ZNE9 571 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 MCF2L2Q86YR7 1114 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 SUMF1Q8NBK3 374 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 RIN2Q8WYP3 895 aaPredicted RBP7.63□□□□□ -1.19
SMC4-217ENST00000485867 PDCD2LQ9BRP1 358 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 ADAM7Q9H2U9 754 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 BCAS3Q9H6U6 928 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 PCDHB12Q9Y5F1 795 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 CDY2AQ9Y6F7 541 aa7.63□□□□□ -1.19
SMC4-217ENST00000485867 PATJQ8NI35 1801 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 HIDE1A8MVS5 230 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 FOXP2O15409 715 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 ORC4O43929 436 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 ADRB1P08588 477 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 TGFB3P10600 412 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 HSPD1P10809 573 aaKnown RBP7.62□□□□□ -1.19
SMC4-217ENST00000485867 MYCLP12524 364 aaPredicted RBP7.62□□□□□ -1.19
SMC4-217ENST00000485867 SCG2P13521 617 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 ITIH2P19823 946 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 CD52P31358 61 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 MAPK8P45983 427 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 ITIH3Q06033 890 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 SPOUT1Q5T280 376 aaKnown RBP7.62□□□□□ -1.19
SMC4-217ENST00000485867 CES5AQ6NT32 575 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 TAF2Q6P1X5 1199 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 ZC3H14Q6PJT7 736 aaKnown RBP7.62□□□□□ -1.19
SMC4-217ENST00000485867 SIRT2Q8IXJ6 389 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 THNSL1Q8IYQ7 743 aa7.62□□□□□ -1.19
SMC4-217ENST00000485867 COLGALT1Q8NBJ5 622 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms