RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 TNFSF13BQ9Y275 285 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 GIT1Q9Y2X7 761 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 RBM19Q9Y4C8 960 aaKnown RBP6.3□□□□□ -1.4
CUX1-208ENST00000485792 IPPQ9Y573 584 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 KMT2EQ8IZD2 1858 aa6.3□□□□□ -1.4
CUX1-208ENST00000485792 PHLPP2Q6ZVD8 1323 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 TBKBP1A7MCY6 615 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 POM121CA8CG34 1229 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 HIDE1A8MVS5 230 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 NT5C1B-RDH14C9J2C7 533 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 INO80B-WBP1J3KQ70 363 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 SPTLC2O15270 562 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 TECTAO75443 2155 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 NPTXRO95502 500 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 C1RP00736 705 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 GALTP07902 379 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 BMP1P13497 986 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 LAG3P18627 525 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 MLH1P40692 756 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 UBA7P41226 1012 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 TNFSF9P41273 254 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 SLC11A1P49279 550 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 GTF2BQ00403 316 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 HYAL1Q12794 435 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 CCDC85BQ15834 202 aaPredicted RBP6.29□□□□□ -1.4
CUX1-208ENST00000485792 MAPK6Q16659 721 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 SEZ6Q53EL9 994 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 TCEAL5Q5H9L2 206 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 TWF2Q6IBS0 349 aaKnown RBP6.29□□□□□ -1.4
CUX1-208ENST00000485792 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
CUX1-208ENST00000485792 KCNT2Q6UVM3 1135 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 ZPBP2Q6X784 338 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 TMEM184AQ6ZMB5 413 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 TAS1R1Q7RTX1 841 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 ZBTB33Q86T24 672 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 COLGALT2Q8IYK4 626 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 SLC39A11Q8N1S5 342 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 LRRC43Q8N309 656 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 KLHL23Q8NBE8 558 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 ATXN2LQ8WWM7 1075 aaKnown RBP6.29□□□□□ -1.4
CUX1-208ENST00000485792 AUTS2Q8WXX7 1259 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 LARP4BQ92615 738 aaKnown RBP6.29□□□□□ -1.4
CUX1-208ENST00000485792 STAMQ92783 540 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 B3GALT6Q96L58 329 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 ZMAT2Q96NC0 199 aaKnown RBP6.29□□□□□ -1.4
CUX1-208ENST00000485792 ACO2Q99798 780 aaKnown RBP6.29□□□□□ -1.4
CUX1-208ENST00000485792 MRPL9Q9BYD2 267 aaKnown RBP6.29□□□□□ -1.4
CUX1-208ENST00000485792 CDT1Q9H211 546 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 NRDE2Q9H7Z3 1164 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 GOLGA2P5Q9HBQ8 144 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 KANSL3Q9P2N6 904 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 LRFN2Q9ULH4 789 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 PCDHA7Q9UN72 937 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 COG5Q9UP83 839 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 HPSEQ9Y251 543 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 STYXL1Q9Y6J8 313 aa6.29□□□□□ -1.4
CUX1-208ENST00000485792 PTPRJQ12913 1337 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 NUP210Q8TEM1 1887 aaPredicted RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 PATJQ8NI35 1801 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 TTC24A2A3L6 582 aaPredicted RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 ARL5CA6NH57 179 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 LRRIQ4A6NIV6 560 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 ANKRD63C9JTQ0 380 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 K7ERI5 159 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 PPEF2O14830 753 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 SLC16A4O15374 487 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 KLRC4O43908 158 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 CUTAO60888 179 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 FGF18O76093 207 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 ERLIN2O94905 339 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 PRKCBP05771 671 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 AKAP5P24588 427 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 NMT1P30419 496 aaKnown RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 CTNNB1P35222 781 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 SCNN1GP51170 649 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 PEX3P56589 373 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 BCAR1P56945 870 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 MCCD1P59942 119 aaPredicted RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 POU5F1Q01860 360 aaKnown RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 MCL1Q07820 350 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 ADAM15Q13444 863 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 ZBTB6Q15916 424 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 ZC2HC1CQ53FD0 456 aaPredicted RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 NOMO2Q5JPE7 1267 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 RESP18Q5W5W9 173 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 KANK3Q6NY19 840 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 GLB1LQ6UWU2 654 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 ZNF720Q7Z2F6 126 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 DDX53Q86TM3 631 aaKnown RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.28□□□□□ -1.4
CUX1-208ENST00000485792 ZBTB8OSQ8IWT0 167 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 CXorf38Q8TB03 319 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 FAM174AQ8TBP5 190 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 KCNG4Q8TDN1 519 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 TMEM174Q8WUU8 243 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 POF1BQ8WVV4 589 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 MRPS27Q92552 414 aaKnown RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 PGBD4Q96DM1 585 aa6.28□□□□□ -1.4
CUX1-208ENST00000485792 PABPC5Q96DU9 382 aaKnown RBP6.28□□□□□ -1.4
CUX1-208ENST00000485792 CALML4Q96GE6 196 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms