RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-208ENST00000484084 SATB1Q01826 763 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 AKAP17AQ02040 695 aaKnown RBP9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 SRSF5Q13243 272 aaKnown RBP9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 GRM2Q14416 872 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 UPP1Q16831 310 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 FAM187BQ17R55 369 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 PPM1JQ5JR12 505 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 LIN9Q5TKA1 542 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 EEF1DP3Q658K8 133 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 NCAPH2Q6IBW4 605 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 GALNT17Q6IS24 598 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 OTUD6AQ7L8S5 288 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 KRT25Q7Z3Z0 450 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 NEK8Q86SG6 692 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 TPH2Q8IWU9 490 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 DNASE1L2Q92874 299 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 RSPRY1Q96DX4 576 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 DDX27Q96GQ7 796 aaKnown RBP9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 PPP1R10Q96QC0 940 aaKnown RBP9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 EIF2AK1Q9BQI3 630 aaKnown RBP9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 ZSWIM6Q9HCJ5 1215 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 SNTG2Q9NY99 539 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 GDE1Q9NZC3 331 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 PARP2Q9UGN5 583 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 POLIQ9UNA4 740 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 BACE2Q9Y5Z0 518 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 CDY1Q9Y6F8 540 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 LAMA1P25391 3075 aa9.56□□□□□ -0.88
RTFDC1-208ENST00000484084 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 WDR27A2RRH5 827 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 I3L4J1 428 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 CCNT1O60563 726 aaKnown RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 DKC1O60832 514 aaKnown RBP eCLIP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 XYLBO75191 536 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 DGAT1O75907 488 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 RECQL4O94761 1208 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 SEC24AO95486 1093 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 TKTP29401 623 aaKnown RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 CLCNKBP51801 687 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 SOX4Q06945 474 aaPredicted RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 SSRP1Q08945 709 aaKnown RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 TFDP1Q14186 410 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 LAIR1Q6GTX8 287 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 SLC8B1Q6J4K2 584 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 VITQ6UXI7 678 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 RTL10Q7L3V2 364 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 NOSTRINQ8IVI9 506 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 FAM177A1Q8N128 213 aaPredicted RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 CELF5Q8N6W0 485 aaKnown RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 PIGOQ8TEQ8 1089 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 ASB16Q96NS5 453 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 TRIM6Q9C030 488 aaPredicted RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 POLR3FQ9H1D9 316 aaPredicted RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 SLKQ9H2G2 1235 aaPredicted RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 ZNF334Q9HCZ1 680 aaPredicted RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 TRPV5Q9NQA5 729 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 RXFP3Q9NSD7 469 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 SEMA4GQ9NTN9 838 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 ANKEF1Q9NU02 776 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 USP18Q9UMW8 372 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 MRPS23Q9Y3D9 190 aaKnown RBP9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 TRIP11Q15643 1979 aa9.55□□□□□ -0.88
RTFDC1-208ENST00000484084 CDC45O75419 566 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 MICAL2O94851 1124 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 CTDNEP1O95476 244 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 VNN2O95498 520 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 THP07101 528 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 RETP07949 1114 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 GCFC2P16383 781 aaKnown RBP9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 PMLP29590 882 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 VIPR2P41587 438 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 BRCC3P46736 316 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 ROR1Q01973 937 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 MRPL58Q14197 206 aaKnown RBP9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 CSRP2Q16527 193 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 XKR4Q5GH76 650 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 ALKAL1Q6UXT8 129 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 PRR23CQ6ZRP0 262 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 PIK3AP1Q6ZUJ8 805 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 RUFY3Q7L099 469 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 ZNF461Q8TAF7 563 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 NETO1Q8TDF5 533 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 ZNF274Q96GC6 653 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 PRIMPOLQ96LW4 560 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 YTHDC1Q96MU7 727 aaKnown RBP9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 LRRC3BQ96PB8 259 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 MTMR9Q96QG7 549 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 LRRC3Q9BY71 257 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 LMAN1LQ9HAT1 526 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 GOLGA2P5Q9HBQ8 144 aa9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 NDRG2Q9UN36 371 aaKnown RBP9.54□□□□□ -0.88
RTFDC1-208ENST00000484084 PDCD11Q14690 1871 aaKnown RBP9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 NCAM2O15394 837 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 LRP3O75074 770 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 PAPSS2O95340 614 aaPredicted RBP9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 FDPSP14324 419 aaKnown RBP9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 PTPN2P17706 415 aa9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 RBM25P49756 843 aaKnown RBP9.53□□□□□ -0.88
RTFDC1-208ENST00000484084 EPHA5P54756 1037 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms