RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SLFN12Q8IYM2 578 aa14.25□□□□□ -0.13
UBR4-213ENST00000483922 TCEAL4Q96EI5 215 aa14.25□□□□□ -0.13
UBR4-213ENST00000483922 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
UBR4-213ENST00000483922 ZSWIM3Q96MP5 696 aa14.25□□□□□ -0.13
UBR4-213ENST00000483922 CCDC113Q9H0I3 377 aa14.25□□□□□ -0.13
UBR4-213ENST00000483922 TTC12Q9H892 705 aaPredicted RBP14.25□□□□□ -0.13
UBR4-213ENST00000483922 GOLGA2P5Q9HBQ8 144 aa14.25□□□□□ -0.13
UBR4-213ENST00000483922 KCNH3Q9ULD8 1083 aa14.25□□□□□ -0.13
UBR4-213ENST00000483922 TPCN1Q9ULQ1 816 aa14.25□□□□□ -0.13
UBR4-213ENST00000483922 MRPS23Q9Y3D9 190 aaKnown RBP14.25□□□□□ -0.13
UBR4-213ENST00000483922 CYP46A1Q9Y6A2 500 aa14.25□□□□□ -0.13
UBR4-213ENST00000483922 NCANO14594 1321 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 LRRIQ4A6NIV6 560 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 TBC1D4O60343 1298 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 XYLBO75191 536 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 MOSPD3O75425 235 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 MED24O75448 989 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 SEC24AO95486 1093 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 TXKP42681 527 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 BRCC3P46736 316 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 GAS6Q14393 721 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 UPP1Q16831 310 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 GLRA4Q5JXX5 417 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.24□□□□□ -0.13
UBR4-213ENST00000483922 CATSPER3Q86XQ3 398 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 DDX27Q96GQ7 796 aaKnown RBP14.24□□□□□ -0.13
UBR4-213ENST00000483922 PRIMPOLQ96LW4 560 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 PPP1R10Q96QC0 940 aaKnown RBP14.24□□□□□ -0.13
UBR4-213ENST00000483922 NELL2Q99435 816 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 TM6SF1Q9BZW5 370 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 TMEM60Q9H2L4 133 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 AVENQ9NQS1 362 aaPredicted RBP14.24□□□□□ -0.13
UBR4-213ENST00000483922 PRMT7Q9NVM4 692 aaPredicted RBP14.24□□□□□ -0.13
UBR4-213ENST00000483922 CHD6Q8TD26 2715 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 COL4A2P08572 1712 aa14.24□□□□□ -0.13
UBR4-213ENST00000483922 STK36Q9NRP7 1315 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 USP24Q9UPU5 2620 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 MEFVO15553 781 aaPredicted RBP14.23□□□□□ -0.13
UBR4-213ENST00000483922 ABLIM3O94929 683 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 BAG4O95429 457 aaKnown RBP14.23□□□□□ -0.13
UBR4-213ENST00000483922 XRCC6P12956 609 aaKnown RBP eCLIP14.23□□□□□ -0.13
UBR4-213ENST00000483922 MAGEA9P43362 315 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 SOX4Q06945 474 aaPredicted RBP14.23□□□□□ -0.13
UBR4-213ENST00000483922 ADCY1Q08828 1119 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 GRM2Q14416 872 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 LPAL2Q16609 132 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 WDR44Q5JSH3 913 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 FAM78AQ5JUQ0 283 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 NT5DC1Q5TFE4 455 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 GPR161Q8N6U8 529 aaKnown RBP14.23□□□□□ -0.13
UBR4-213ENST00000483922 ELSPBP1Q96BH3 223 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 PDRG1Q9NUG6 133 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 GDAQ9Y2T3 454 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 BACE2Q9Y5Z0 518 aa14.23□□□□□ -0.13
UBR4-213ENST00000483922 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.23□□□□□ -0.13
UBR4-213ENST00000483922 ARHGEF37A1IGU5 675 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 WDR27A2RRH5 827 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 PRR5-ARHGAP8B1AHC4 643 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 BTBD18B2RXH4 712 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 TMEM189-UBE2V1I3L0A0 370 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 ACKR2O00590 384 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 PFKFB2O60825 505 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 B3GAT3O94766 335 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 ARHGAP8P85298 464 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 ROR1Q01973 937 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 DMWDQ09019 674 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 SPEM2Q0P670 501 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 PRPF4BQ13523 1007 aaKnown RBP14.22□□□□□ -0.13
UBR4-213ENST00000483922 SLC8B1Q6J4K2 584 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 ZNF852Q6ZMS4 543 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 MAMSTRQ6ZN01 415 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 MAP4K3Q8IVH8 894 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 ZNF461Q8TAF7 563 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 NAP1L4Q99733 375 aaKnown RBP14.22□□□□□ -0.13
UBR4-213ENST00000483922 GDE1Q9NZC3 331 aa14.22□□□□□ -0.13
UBR4-213ENST00000483922 NDRG2Q9UN36 371 aaKnown RBP14.22□□□□□ -0.13
UBR4-213ENST00000483922 MAP1BP46821 2468 aaKnown RBP14.21□□□□□ -0.13
UBR4-213ENST00000483922 N4BP3O15049 544 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 HRO43593 1189 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 PRKCBP05771 671 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 PTPN2P17706 415 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 ATP2B1P20020 1258 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 RBM25P49756 843 aaKnown RBP14.21□□□□□ -0.13
UBR4-213ENST00000483922 ELAVL2Q12926 359 aaKnown RBP14.21□□□□□ -0.13
UBR4-213ENST00000483922 MRPL58Q14197 206 aaKnown RBP14.21□□□□□ -0.13
UBR4-213ENST00000483922 CALCRLQ16602 461 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 PDXDC1Q6P996 788 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 CPLX2Q6PUV4 134 aaKnown RBP14.21□□□□□ -0.13
UBR4-213ENST00000483922 ALKAL1Q6UXT8 129 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 HS6ST3Q8IZP7 471 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 TMEM130Q8N3G9 435 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 CEP120Q8N960 986 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 RSPRY1Q96DX4 576 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 ZMAT2Q96NC0 199 aaKnown RBP14.21□□□□□ -0.13
UBR4-213ENST00000483922 RTKNQ9BST9 563 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 KIFC3Q9BVG8 833 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 CHRDQ9H2X0 955 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 LMAN1LQ9HAT1 526 aa14.21□□□□□ -0.13
UBR4-213ENST00000483922 ZNF334Q9HCZ1 680 aaPredicted RBP14.21□□□□□ -0.13
UBR4-213ENST00000483922 C2orf42Q9NWW7 574 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms