RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 GRXCR1A8MXD5 290 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 GOLGA6L19H0YKK7 550 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 IL18RAPO95256 599 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 GJB5O95377 273 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 ATP2A2P16615 1042 aaKnown RBP15.31■□□□□ 0.04
SRSF6-202ENST00000483871 MTIF2P46199 727 aaKnown RBP15.31■□□□□ 0.04
SRSF6-202ENST00000483871 GUCY2FP51841 1108 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 POU5F1Q01860 360 aaKnown RBP15.31■□□□□ 0.04
SRSF6-202ENST00000483871 PPP3CAQ08209 521 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 ZBTB6Q15916 424 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 NOMO2Q5JPE7 1267 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 ABI1Q8IZP0 508 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 TMC2Q8TDI7 906 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 C18orf25Q96B23 403 aaPredicted RBP15.31■□□□□ 0.04
SRSF6-202ENST00000483871 ZNF689Q96CS4 500 aaPredicted RBP15.31■□□□□ 0.04
SRSF6-202ENST00000483871 RPS6KC1Q96S38 1066 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 GOLGA2P5Q9HBQ8 144 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
SRSF6-202ENST00000483871 MAGEC2Q9UBF1 373 aaPredicted RBP15.31■□□□□ 0.04
SRSF6-202ENST00000483871 CACNG4Q9UBN1 327 aa15.31■□□□□ 0.04
SRSF6-202ENST00000483871 FNDC1Q4ZHG4 1894 aaPredicted RBP15.3■□□□□ 0.04
SRSF6-202ENST00000483871 DDHD2O94830 711 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 THP07101 528 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 KCNE1P15382 129 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
SRSF6-202ENST00000483871 SOX4Q06945 474 aaPredicted RBP15.3■□□□□ 0.04
SRSF6-202ENST00000483871 NAB2Q15742 525 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 ZNF280BQ86YH2 543 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 FAM114A1Q8IWE2 563 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 SLC35C1Q96A29 364 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 PPP1R10Q96QC0 940 aaKnown RBP15.3■□□□□ 0.04
SRSF6-202ENST00000483871 TUBGCP2Q9BSJ2 902 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 ZBED2Q9BTP6 218 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 TMEM117Q9H0C3 514 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 MTIF3Q9H2K0 278 aaKnown RBP15.3■□□□□ 0.04
SRSF6-202ENST00000483871 TBC1D13Q9NVG8 400 aa15.3■□□□□ 0.04
SRSF6-202ENST00000483871 B4GALT3O60512 393 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 GCLMP48507 274 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 RABGGTBP53611 331 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 MCCD1P59942 119 aaPredicted RBP15.29■□□□□ 0.04
SRSF6-202ENST00000483871 CLDN10P78369 228 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 KCNH2Q12809 1159 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 TMEM132DQ14C87 1099 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 KRT31Q15323 416 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 SURF1Q15526 300 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 HERC6Q8IVU3 1022 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 CD302Q8IX05 232 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 PHOSPHO2Q8TCD6 241 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 SLC9A7Q96T83 725 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 CGRRF1Q99675 332 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 MTMR12Q9C0I1 747 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 VPS16Q9H269 839 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 RC3H2Q9HBD1 1191 aaKnown RBP15.29■□□□□ 0.04
SRSF6-202ENST00000483871 INTS13Q9NVM9 706 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 RNF216Q9NWF9 866 aaPredicted RBP15.29■□□□□ 0.04
SRSF6-202ENST00000483871 TAB2Q9NYJ8 693 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 TUBGCP4Q9UGJ1 667 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
SRSF6-202ENST00000483871 TDRD15B5MCY1 1934 aaKnown RBP15.29■□□□□ 0.04
SRSF6-202ENST00000483871 COL4A6Q14031 1691 aa15.29■□□□□ 0.04
SRSF6-202ENST00000483871 INPPL1O15357 1258 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 HOXA2O43364 376 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 C4BPAP04003 597 aaKnown RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 EEF1GP26641 437 aaKnown RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 BMP8BP34820 402 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 HSP90AA2PQ14568 343 aaPredicted RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 CBWD6Q4V339 395 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 CBWD3Q5JTY5 395 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 MIIPQ5JXC2 388 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 CBWD5Q5RIA9 395 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 APTXQ7Z2E3 356 aaKnown RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 WDR49Q8IV35 697 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 YME1L1Q96TA2 773 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 PAAF1Q9BRP4 392 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 C2CD2Q9Y426 696 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 RALGAPA2Q2PPJ7 1873 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 LRRN2O75325 713 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 CST3P01034 146 aaPredicted RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 TMEM191BP0C7N4 346 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 MYOGP15173 224 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 IGFBP6P24592 240 aaPredicted RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 HTRA4P83105 476 aaPredicted RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 RNASELQ05823 741 aaKnown RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 DUOXA2Q1HG44 320 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 SV2AQ7L0J3 742 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 C1orf127Q8N9H9 656 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 URGCPQ8TCY9 931 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 ELMO3Q96BJ8 720 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 NRDE2Q9H7Z3 1164 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 KANSL3Q9P2N6 904 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 DNAJB4Q9UDY4 337 aa15.28■□□□□ 0.04
SRSF6-202ENST00000483871 LIMA1Q9UHB6 759 aaKnown RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 UBQLN1Q9UMX0 589 aaKnown RBP15.28■□□□□ 0.04
SRSF6-202ENST00000483871 PDCD11Q14690 1871 aaKnown RBP15.27■□□□□ 0.04
SRSF6-202ENST00000483871 LCHNA4D1U4 455 aa15.27■□□□□ 0.03
SRSF6-202ENST00000483871 CASTOR2A6NHX0 329 aa15.27■□□□□ 0.03
SRSF6-202ENST00000483871 LRRC10BA6NIK2 292 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms