RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TRAPPC11Q7Z392 1133 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 CDR2LQ86X02 465 aaPredicted RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 GLYCTKQ8IVS8 523 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 NME8Q8N427 588 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 EPS8L1Q8TE68 723 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 U2AF1L4Q8WU68 220 aaKnown RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 DHX38Q92620 1227 aaKnown RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 PPP1R16BQ96T49 567 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 MTG1Q9BT17 334 aaPredicted RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 RPF1Q9H9Y2 349 aaKnown RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 APOBEC3GQ9HC16 384 aaKnown RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 C1orf112Q9NSG2 853 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 HDAC6Q9UBN7 1215 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 CNTN6Q9UQ52 1028 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 CAPN6Q9Y6Q1 641 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 SCN10AQ9Y5Y9 1956 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 A0A0A6YYK5 440 aaPredicted RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 MEFVO15553 781 aaPredicted RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 CYP26A1O43174 497 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 TREHO43280 583 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 SGPL1O95470 568 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 ASS1P00966 412 aaKnown RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 STAG3L1P0CL83 205 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 GNAT1P11488 350 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 ACO1P21399 889 aaKnown RBP15.12■□□□□ 0.01
CLK3-204ENST00000483723 NCOA4Q13772 614 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 TMEM132AQ24JP5 1023 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 EFCAB13Q8IY85 973 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 TMEM192Q8IY95 271 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 CPB2Q96IY4 423 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 NOX5Q96PH1 765 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 ASB7Q9H672 318 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 CDHR5Q9HBB8 845 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.12■□□□□ 0.018e-7■■■■■ 96.2
CLK3-204ENST00000483723 JRKLQ9Y4A0 524 aa15.12■□□□□ 0.01
CLK3-204ENST00000483723 C17orf102A2RUQ5 167 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 C6orf222P0C671 652 aaPredicted RBP15.11■□□□□ 0.01
CLK3-204ENST00000483723 DARSP14868 501 aaKnown RBP15.11■□□□□ 0.01
CLK3-204ENST00000483723 PRLRP16471 622 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 HOXA11P31270 313 aaPredicted RBP15.11■□□□□ 0.01
CLK3-204ENST00000483723 MAP2K2P36507 400 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 GALCP54803 685 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 TRIM32Q13049 653 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 KIZQ2M2Z5 673 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 GNASQ5JWF2 1037 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 SCARA3Q6AZY7 606 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 NOP9Q86U38 636 aaKnown RBP15.11■□□□□ 0.01
CLK3-204ENST00000483723 SLC20A1Q8WUM9 679 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 DNAJB3Q8WWF6 145 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 DDX1Q92499 740 aaKnown RBP15.11■□□□□ 0.01
CLK3-204ENST00000483723 FAM49AQ9H0Q0 323 aaPredicted RBP15.11■□□□□ 0.01
CLK3-204ENST00000483723 ISCUQ9H1K1 167 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 PCDHGC5Q9Y5F6 944 aa15.11■□□□□ 0.01
CLK3-204ENST00000483723 TULP1O00294 542 aaPredicted RBP15.1■□□□□ 0.01
CLK3-204ENST00000483723 PHACTR2O75167 634 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 ADAMTS4O75173 837 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 ERLIN2O94905 339 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 ATP1A1P05023 1023 aaKnown RBP15.1■□□□□ 0.01
CLK3-204ENST00000483723 TMEM253P0C7T8 217 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 GZMAP12544 262 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 CYP11B1P15538 503 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 TBXAS1P24557 533 aaPredicted RBP15.1■□□□□ 0.01
CLK3-204ENST00000483723 USP8P40818 1118 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 HTRA3P83110 453 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 ZNF200P98182 395 aaPredicted RBP15.1■□□□□ 0.01
CLK3-204ENST00000483723 CUL2Q13617 745 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 SGSM1Q2NKQ1 1148 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 SLC10A6Q3KNW5 377 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 SPOPLQ6IQ16 392 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 UBR7Q8N806 425 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 KLHDC9Q8NEP7 349 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 PPP1R13LQ8WUF5 828 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 ELMO3Q96BJ8 720 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 CARD6Q9BX69 1037 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 SRRDQ9UH36 339 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 NUB1Q9Y5A7 615 aa15.1■□□□□ 0.01
CLK3-204ENST00000483723 LACTBL1A8MY62 500 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 CXCL8P10145 99 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 RARBP10826 455 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 EIF4BP23588 611 aaKnown RBP15.09■□□□□ 0.01
CLK3-204ENST00000483723 HOXD10P28358 340 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 AXLP30530 894 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 GRM5P41594 1212 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 CHMP4BP1P59074 171 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 OSTNP61366 133 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 NOP14P78316 857 aaKnown RBP15.09■□□□□ 0.01
CLK3-204ENST00000483723 FMO1Q01740 532 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 CDR2Q01850 454 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 TCEAL1Q15170 157 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 WHAMMP3Q1A5X7 153 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 DCAF4L1Q3SXM0 396 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 SLC47A2Q86VL8 602 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 PALB2Q86YC2 1186 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 RPUSD2Q8IZ73 545 aaKnown RBP15.09■□□□□ 0.01
CLK3-204ENST00000483723 LRRN4CLQ8ND94 238 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 FAM212AQ96EL1 285 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 FAXDC2Q96IV6 333 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 SCLT1Q96NL6 688 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 ALS2CR12Q96Q35 445 aa15.09■□□□□ 0.01
CLK3-204ENST00000483723 PCDHB18PQ96TA0 734 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms