RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 NOP53Q9NZM5 478 aaKnown RBP16.3■□□□□ 0.2
DDR1-244ENST00000482873 PTPN22Q9Y2R2 807 aa16.3■□□□□ 0.2
DDR1-244ENST00000482873 PCDHA3Q9Y5H8 950 aa16.3■□□□□ 0.2
DDR1-244ENST00000482873 ANKRD33BA6NCL7 494 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 KRT16P08779 473 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 BCRP11274 1271 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 CCNHP51946 323 aaPredicted RBP16.29■□□□□ 0.2
DDR1-244ENST00000482873 NBPF12Q5TAG4 269 aaPredicted RBP16.29■□□□□ 0.2
DDR1-244ENST00000482873 KREMEN1Q96MU8 473 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 RASAL2Q9UJF2 1139 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 USP15Q9Y4E8 981 aaPredicted RBP16.29■□□□□ 0.2
DDR1-244ENST00000482873 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 TCP11X1B4DZS4 312 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 PHF2O75151 1096 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 RNF207Q6ZRF8 634 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 INTS8Q75QN2 995 aaKnown RBP16.29■□□□□ 0.2
DDR1-244ENST00000482873 ANO5Q75V66 913 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 OTUD6AQ7L8S5 288 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 SPDL1Q96EA4 605 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 CAMKK2Q96RR4 588 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 PGAP2Q9UHJ9 254 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
DDR1-244ENST00000482873 DENND3A2RUS2 1198 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 ANKRD62A6NC57 917 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 SARNPP82979 210 aaKnown RBP16.28■□□□□ 0.2
DDR1-244ENST00000482873 SNRNP35Q16560 246 aaKnown RBP16.28■□□□□ 0.2
DDR1-244ENST00000482873 CYFIP1Q7L576 1253 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 TAS1R2Q8TE23 839 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 KLHL29Q96CT2 875 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 TMEM109Q9BVC6 243 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 MLXIPLQ9NP71 852 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 BATF3Q9NR55 127 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 GABBR1Q9UBS5 961 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 PNMA3Q9UL41 463 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 CNGA1P29973 690 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 NPTX2P47972 431 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 KCNJ1P48048 391 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 BNIP1Q12981 228 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 LONRF1Q17RB8 773 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 ERICH1Q86X53 443 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 DYDC1Q8WWB3 177 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 CEP170P1Q96L14 293 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 PDCD2LQ9BRP1 358 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 SLC38A10Q9HBR0 1119 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 MTRF1LQ9UGC7 380 aaKnown RBP16.28■□□□□ 0.2
DDR1-244ENST00000482873 TRIM33Q9UPN9 1127 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 STK38LQ9Y2H1 464 aa16.28■□□□□ 0.2
DDR1-244ENST00000482873 ZNF646O15015 1829 aaPredicted RBP16.27■□□□□ 0.2
DDR1-244ENST00000482873 FOXO6A8MYZ6 492 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 CHRNB2P17787 502 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 COMTP21964 271 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 CHRNA3P32297 505 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 COPS2P61201 443 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 CETN1Q12798 172 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 NUGGCQ68CJ6 796 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 CCDC137Q6PK04 289 aaKnown RBP16.27■□□□□ 0.2
DDR1-244ENST00000482873 TAOK1Q7L7X3 1001 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 TRIM7Q9C029 511 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 TMEM206Q9H813 350 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 KCND2Q9NZV8 630 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 PCYOX1Q9UHG3 505 aa16.27■□□□□ 0.2
DDR1-244ENST00000482873 RARGP13631 454 aa16.27■□□□□ 0.19
DDR1-244ENST00000482873 KIF22Q14807 665 aa16.27■□□□□ 0.19
DDR1-244ENST00000482873 SWSAP1Q6NVH7 229 aa16.27■□□□□ 0.19
DDR1-244ENST00000482873 DLK2Q6UY11 383 aa16.27■□□□□ 0.19
DDR1-244ENST00000482873 FITM2Q8N6M3 262 aa16.27■□□□□ 0.19
DDR1-244ENST00000482873 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.27■□□□□ 0.19
DDR1-244ENST00000482873 TMEM120BA0PK00 339 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 HGSO14964 777 aaPredicted RBP16.26■□□□□ 0.19
DDR1-244ENST00000482873 ZBTB7AO95365 584 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 KRT5P13647 590 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 CCND1P24385 295 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 IRX1P78414 480 aaPredicted RBP16.26■□□□□ 0.19
DDR1-244ENST00000482873 CCDC25Q86WR0 208 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 EPS8L1Q8TE68 723 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 POMGNT1Q8WZA1 660 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 TEPSINQ96N21 525 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 ARHGEF3Q9NR81 526 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 SLC5A4Q9NY91 659 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 PFASO15067 1338 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 SYNGAP1Q96PV0 1343 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 PODXLO00592 558 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 ZNF862O60290 1169 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 TBC1D12O60347 775 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 NFIL3Q16649 462 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 CIAPIN1Q6FI81 312 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 MFSD5Q6N075 450 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 CROCCP2Q86T23 111 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 FAM83AQ86UY5 434 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 MCF2L2Q86YR7 1114 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 SLC9A9Q8IVB4 645 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 DDX23Q9BUQ8 820 aaKnown RBP16.26■□□□□ 0.19
DDR1-244ENST00000482873 STMN4Q9H169 189 aaPredicted RBP16.26■□□□□ 0.19
DDR1-244ENST00000482873 KMT5AQ9NQR1 393 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 PXMP2Q9NR77 195 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 HOMER3Q9NSC5 361 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 RNF146Q9NTX7 359 aa16.26■□□□□ 0.19
DDR1-244ENST00000482873 TBX20Q9UMR3 447 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms