RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 ZWINTO95229 277 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 GAS8O95995 478 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 PTK6Q13882 451 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 LLGL1Q15334 1064 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 TRIP13Q15645 432 aaPredicted RBP11.74□□□□□ -0.53
RPGR-208ENST00000482855 ACSBG2Q5FVE4 666 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 RBM26Q5T8P6 1007 aaKnown RBP11.74□□□□□ -0.53
RPGR-208ENST00000482855 FYB2Q5VWT5 728 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 SYDE1Q6ZW31 735 aaPredicted RBP11.74□□□□□ -0.53
RPGR-208ENST00000482855 MTDHQ86UE4 582 aaKnown RBP11.74□□□□□ -0.53
RPGR-208ENST00000482855 NEDD1Q8NHV4 660 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 TGFBRAP1Q8WUH2 860 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 ZNF184Q99676 751 aaPredicted RBP11.74□□□□□ -0.53
RPGR-208ENST00000482855 ZWILCHQ9H900 591 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 C2CD2LO14523 706 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 TBX10O75333 385 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 UBTFL6P0CB48 400 aaPredicted RBP11.74□□□□□ -0.53
RPGR-208ENST00000482855 ADCY8P40145 1251 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 STAT3P40763 770 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 CLNKQ7Z7G1 428 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 TRABD2AQ86V40 505 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 LINC00116Q8NCU8 138 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 DTX3LQ8TDB6 740 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 SNED1Q8TER0 1413 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 MCUR1Q96AQ8 359 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 CEP95Q96GE4 821 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 PWWP2AQ96N64 755 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 NAP1L4Q99733 375 aaKnown RBP11.74□□□□□ -0.53
RPGR-208ENST00000482855 LBHD1Q9BQE6 289 aaPredicted RBP11.74□□□□□ -0.53
RPGR-208ENST00000482855 BTBD10Q9BSF8 475 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 PLVAPQ9BX97 442 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 SYNCQ9H7C4 482 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 EURLQ9NYK6 297 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 G3BP2Q9UN86 482 aaKnown RBP11.74□□□□□ -0.53
RPGR-208ENST00000482855 DNM3Q9UQ16 869 aa11.74□□□□□ -0.53
RPGR-208ENST00000482855 FOXN3O00409 490 aaPredicted RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 PRPF4O43172 522 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■■■■□ 22.4
RPGR-208ENST00000482855 SORBS3O60504 671 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 TBCAO75347 108 aaKnown RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 IVDP26440 423 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 MAN1A1P33908 653 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CDK8P49336 464 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 MCL1Q07820 350 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 KCNA1Q09470 495 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CNPY1Q3B7I2 92 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 ZC2HC1CQ53FD0 456 aaPredicted RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 HS2ST1Q7LGA3 356 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 MAPKAPK5Q8IW41 473 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 SYT2Q8N9I0 419 aaPredicted RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 DENND1AQ8TEH3 1009 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 GRK7Q8WTQ7 553 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 MAML1Q92585 1016 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 AZIN2Q96A70 460 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 C9orf72Q96LT7 481 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 NR1H4Q96RI1 486 aaPredicted RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 TRABDQ9H4I3 376 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 STX18Q9P2W9 335 aaKnown RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 ZNF212Q9UDV6 495 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 SMG5Q9UPR3 1016 aaKnown RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 ZMYM2Q9UBW7 1377 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 EXOC1LA0A1B0GW35 172 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 MEIS1O00470 390 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 GYG2O15488 501 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 EXOC3O60645 756 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 VPS41P49754 854 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 PSMC6P62333 389 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 USP4Q13107 963 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 ITPK1Q13572 414 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CBWD6Q4V339 395 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CBWD3Q5JTY5 395 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CBWD5Q5RIA9 395 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 OTOAQ7RTW8 1153 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 PRUNE1Q86TP1 453 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 SMC6Q96SB8 1091 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 NPHS2Q9NP85 383 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CCDC87Q9NVE4 849 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 ATXN10Q9UBB4 475 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.73□□□□□ -0.53
RPGR-208ENST00000482855 SLC4A7Q9Y6M7 1214 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 MYO3BQ8WXR4 1341 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 RSPH10B2B2RC85 870 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 GSC2O15499 205 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 MTA2O94776 668 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 RSPH10BP0C881 870 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 BCRP11274 1271 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 MYL7Q01449 175 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CTC1Q2NKJ3 1217 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 HHATQ5VTY9 493 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 ZNF746Q6NUN9 644 aaPredicted RBP11.73□□□□□ -0.53
RPGR-208ENST00000482855 CATSPER3Q86XQ3 398 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CPNE8Q86YQ8 564 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 TUBB6Q9BUF5 446 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 RUSC1Q9BVN2 902 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 SPATA16Q9BXB7 569 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 CHST7Q9NS84 486 aa11.73□□□□□ -0.53
RPGR-208ENST00000482855 PHF24Q9UPV7 400 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms