RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 ITIH6Q6UXX5 1313 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 APOL1O14791 398 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 PFDN1O60925 122 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 MOCS2O96007 188 aaPredicted RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 CASP1P29466 404 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ANTXR2P58335 489 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ELAVL2Q12926 359 aaKnown RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 TRIP13Q15645 432 aaPredicted RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 P3H1Q32P28 736 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 FAM163AQ96GL9 167 aaPredicted RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 GBP5Q96PP8 586 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 CENPKQ9BS16 269 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 FOXP3Q9BZS1 431 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 SIK2Q9H0K1 926 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 TRIM45Q9H8W5 580 aaPredicted RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 TXLNGQ9NUQ3 528 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 SATB2Q9UPW6 733 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ZC3H4Q9UPT8 1303 aaKnown RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 ZMYM2Q9UBW7 1377 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 H7C4K7 107 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 LIG3P49916 1009 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 NME3Q13232 169 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 CRYMQ14894 314 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 LLGL1Q15334 1064 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 UGP2Q16851 508 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ARHGAP15Q53QZ3 475 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 TRIM59Q8IWR1 403 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 MRIQ9BWK5 157 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 TSSK1BQ9BXA7 367 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 MRPL40Q9NQ50 206 aaKnown RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 ITGB1BP2Q9UKP3 347 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 PCDHB7Q9Y5E2 793 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 E5RI56 91 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 SEC31AO94979 1220 aaKnown RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 TFRCP02786 760 aaKnown RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 TCF7P36402 384 aaPredicted RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 SREBF1P36956 1147 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 SESN3P58005 492 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 MUM1Q2TAK8 710 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ANKRD20A4Q4UJ75 823 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ANKRD20A8PQ5CZ79 823 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ANKRD20A2Q5SQ80 823 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 ANKRD20A1Q5TYW2 823 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 TBC1D19Q8N5T2 526 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 SYT2Q8N9I0 419 aaPredicted RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 ZNF668Q96K58 619 aaPredicted RBP10□□□□□ -0.81
GARNL3-216ENST00000481242 RABEP2Q9H5N1 569 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 BCL9O00512 1426 aa10□□□□□ -0.81
GARNL3-216ENST00000481242 SLIT1O75093 1534 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 HSPA4LO95757 839 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 PDGFRAP16234 1089 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 ALDH1A3P47895 512 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 ALDH7A1P49419 539 aaKnown RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 OCRLQ01968 901 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 DPYDQ12882 1025 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 TMEM132BQ14DG7 1078 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 SLC18A3Q16572 532 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 FSCBQ5H9T9 825 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 MTHFD1LQ6UB35 978 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 FGD4Q96M96 766 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 ZNF512Q96ME7 567 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 FOPNLQ96NB1 174 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 TAAR1Q96RJ0 339 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 RTFDC1Q9BY42 306 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 UPF3AQ9H1J1 476 aaKnown RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 PPCSQ9HAB8 311 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 SENP1Q9P0U3 644 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 MAGED2Q9UNF1 606 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 OGTO15294 1046 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 PEX19P40855 299 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 ACOT2P49753 483 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 USP50Q70EL3 339 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 CLEC10AQ8IUN9 316 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 DHX40Q8IX18 779 aaKnown RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 RBBP8NLQ8NC74 664 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 SOCS4Q8WXH5 440 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 SENP7Q9BQF6 1050 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 HEMGNQ9BXL5 484 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 ADGRG1Q9Y653 693 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 C3orf70A6NLC5 250 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 GSTA4O15217 222 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 MGEA5O60502 916 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 NAMPTP43490 491 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 NLRP11P59045 1033 aaKnown RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 GFPT1Q06210 699 aaPredicted RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 ART3Q13508 389 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 PID1Q7Z2X4 250 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 METTL16Q86W50 562 aaKnown RBP9.99□□□□□ -0.81
GARNL3-216ENST00000481242 ATL2Q8NHH9 583 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 SEPT8Q92599 483 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 TSC22D3Q99576 134 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 CATSPERBQ9H7T0 1116 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 STK38LQ9Y2H1 464 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 SNX24Q9Y343 169 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 MEGF6O75095 1541 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 MYMKA6NI61 221 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 CYP26A1O43174 497 aa9.99□□□□□ -0.81
GARNL3-216ENST00000481242 YWHAHQ04917 246 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms