RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 C3orf58Q8NDZ4 430 aa14.07□□□□□ -0.16
ABCF3-215ENST00000481116 RPGRIP1Q96KN7 1286 aa14.07□□□□□ -0.16
ABCF3-215ENST00000481116 FBXL18Q96ME1 805 aa14.07□□□□□ -0.16
ABCF3-215ENST00000481116 TOPORSQ9NS56 1045 aaPredicted RBP14.07□□□□□ -0.16
ABCF3-215ENST00000481116 ZDHHC9Q9Y397 364 aa14.07□□□□□ -0.16
ABCF3-215ENST00000481116 SF3B1O75533 1304 aaKnown RBP eCLIP14.07□□□□□ -0.16
ABCF3-215ENST00000481116 I3L4J1 428 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 CUTAO60888 179 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 CXCL8P10145 99 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 IDEP14735 1019 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 BRCC3P46736 316 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 GTF2BQ00403 316 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 UPP1Q16831 310 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 AXDND1Q5T1B0 1012 aaPredicted RBP14.06□□□□□ -0.16
ABCF3-215ENST00000481116 TMC5Q6UXY8 1006 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 PPFIBP1Q86W92 1011 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 PHF7Q9BWX1 381 aaPredicted RBP14.06□□□□□ -0.16
ABCF3-215ENST00000481116 ADAM7Q9H2U9 754 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 POMKQ9H5K3 350 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 RXFP1Q9HBX9 757 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 CNTN3Q9P232 1028 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 SSX2IPQ9Y2D8 614 aa14.06□□□□□ -0.16
ABCF3-215ENST00000481116 FAM86C2PA6NEL3 165 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 LOC730098B7Z3J9 87 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 PI4K2BG5E9Z4 385 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 B3GAT3O94766 335 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 PIGRP01833 764 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 ADH1AP07327 375 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 KCNE1P15382 129 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 KCNA1Q09470 495 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 E2F4Q16254 413 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 CES5AQ6NT32 575 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 DCLRE1AQ6PJP8 1040 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 ZNF720Q7Z2F6 126 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 RNF135Q8IUD6 432 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 MAP4K3Q8IVH8 894 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 LNX1Q8TBB1 728 aaPredicted RBP14.05□□□□□ -0.16
ABCF3-215ENST00000481116 KCNN1Q92952 543 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 DHX58Q96C10 678 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 POP1Q99575 1024 aaKnown RBP14.05□□□□□ -0.16
ABCF3-215ENST00000481116 TTPALQ9BTX7 342 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 FGFBP2Q9BYJ0 223 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 MRPL44Q9H9J2 332 aaKnown RBP14.05□□□□□ -0.16
ABCF3-215ENST00000481116 MAN1C1Q9NR34 630 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 DZANK1Q9NVP4 752 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 PCDHA7Q9UN72 937 aa14.05□□□□□ -0.16
ABCF3-215ENST00000481116 SCN1AP35498 2009 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 LACTBL1A8MY62 500 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 PODXLO00592 558 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 ADAM12O43184 909 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 FAM189A1O60320 539 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 CLTAP09496 248 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 PDIA4P13667 645 aaKnown RBP14.04□□□□□ -0.16
ABCF3-215ENST00000481116 TKTP29401 623 aaKnown RBP14.04□□□□□ -0.16
ABCF3-215ENST00000481116 ME1P48163 572 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 CASP5P51878 434 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 ITIH3Q06033 890 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 PSMD5Q16401 504 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 FAM212AQ96EL1 285 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 UROC1Q96N76 676 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 CLSTN3Q9BQT9 956 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 MSTO1Q9BUK6 570 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 STRA6Q9BX79 667 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 ST6GALNAC4Q9H4F1 302 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 TSHZ2Q9NRE2 1034 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 FNIP2Q9P278 1114 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 TUBGCP4Q9UGJ1 667 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 MUTYHQ9UIF7 546 aa14.04□□□□□ -0.16
ABCF3-215ENST00000481116 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.03□□□□□ -0.16
ABCF3-215ENST00000481116 A0A0B4J269 797 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 TTC26A0AVF1 554 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 TMEM189-UBE2V1I3L0A0 370 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 OGTO15294 1046 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 TGM5O43548 720 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 RFPL2O75678 378 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 PPP1R37O75864 691 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 GCNT3O95395 438 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 GLUD1P00367 558 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 CASP1P29466 404 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 ACOT2P49753 483 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 GUCY2FP51841 1108 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 ENOX2Q16206 610 aaKnown RBP14.03□□□□□ -0.16
ABCF3-215ENST00000481116 HERC4Q5GLZ8 1057 aaPredicted RBP14.03□□□□□ -0.16
ABCF3-215ENST00000481116 KCNG4Q8TDN1 519 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 PIK3R5Q8WYR1 880 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 HPS3Q969F9 1004 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 KIF12Q96FN5 646 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 SFXN1Q9H9B4 322 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 C11orf16Q9NQ32 467 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.03□□□□□ -0.16
ABCF3-215ENST00000481116 SLC38A7Q9NVC3 462 aa14.03□□□□□ -0.16
ABCF3-215ENST00000481116 CCDC195A0A1B0GUA6 201 aa14.02□□□□□ -0.17
ABCF3-215ENST00000481116 FRMD3A2A2Y4 597 aa14.02□□□□□ -0.17
ABCF3-215ENST00000481116 POLR2DO15514 142 aaKnown RBP14.02□□□□□ -0.17
ABCF3-215ENST00000481116 GAP43P17677 238 aa14.02□□□□□ -0.17
ABCF3-215ENST00000481116 FGFR3P22607 806 aa14.02□□□□□ -0.17
ABCF3-215ENST00000481116 MTHFRP42898 656 aa14.02□□□□□ -0.17
ABCF3-215ENST00000481116 PPP2R3AQ06190 1150 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms