RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 PEX26Q7Z412 305 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 TXNDC2Q86VQ3 553 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 CCDC82Q8N4S0 544 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 CSGALNACT2Q8N6G5 542 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 USP38Q8NB14 1042 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 OR6Y1Q8NGX8 325 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 MAML1Q92585 1016 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 ZNF75CPQ92670 426 aaPredicted RBP10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 ZNF274Q96GC6 653 aaPredicted RBP10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 CUEDC2Q9H467 287 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 SERHL2Q9H4I8 314 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 USP40Q9NVE5 1235 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 NCKIPSDQ9NZQ3 722 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 APOBEC2Q9Y235 224 aaKnown RBP10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 CHKBQ9Y259 395 aa10.96□□□□□ -0.65
PRPF4B-206ENST00000481109 STAMBPO95630 424 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 GAS8O95995 478 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 IL13P35225 146 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 IST1P53990 364 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 PPP2R2BQ00005 443 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 RGS21Q2M5E4 152 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 KLHL38Q2WGJ6 581 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 ANKRD20A4Q4UJ75 823 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 RFWD3Q6PCD5 774 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 GALNT7Q86SF2 657 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 NDUFAF2Q8N183 169 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 BTBD9Q96Q07 612 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 IER2Q9BTL4 223 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 CADM1Q9BY67 442 aaKnown RBP10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 MRPL9Q9BYD2 267 aaKnown RBP10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 NEUROG2Q9H2A3 272 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 EBF3Q9H4W6 596 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 MAP3K20Q9NYL2 800 aaKnown RBP10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 GMIPQ9P107 970 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 LRWD1Q9UFC0 647 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 STARD13Q9Y3M8 1113 aa10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.96□□□□□ -0.66
PRPF4B-206ENST00000481109 ZSCAN5BA6NJL1 495 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 SULT1C4O75897 302 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 MOCS3O95396 460 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 ANPEPP15144 967 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 CDK9P50750 372 aaKnown RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 POLR2FP61218 127 aaKnown RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 IGBP1P78318 339 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 C19orf57Q0VDD7 668 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 PDK3Q15120 406 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 KLHDC7AQ5VTJ3 777 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 BRSK2Q8IWQ3 736 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 METTL25Q8N6Q8 603 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 PPP4R1Q8TF05 950 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 ARHGEF2Q92974 986 aaKnown RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 FAM20AQ96MK3 541 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 PHF20Q9BVI0 1012 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 PABPC3Q9H361 631 aaKnown RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 CNNM2Q9H8M5 875 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 MARCH7Q9H992 704 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 CYLDQ9NQC7 956 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 NDE1Q9NXR1 346 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 DBF4Q9UBU7 674 aaPredicted RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 RSL24D1Q9UHA3 163 aaKnown RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 CLEC11AQ9Y240 323 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 B3GNT3Q9Y2A9 372 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 MAD1L1Q9Y6D9 718 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 CEPT1Q9Y6K0 416 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 M0QX08 132 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 RNMTO43148 476 aaKnown RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 ZC3H11AO75152 810 aaKnown RBP eCLIP10.95□□□□□ -0.667e-12■■■■■ 41
PRPF4B-206ENST00000481109 DDHD2O94830 711 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 ALX3O95076 343 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 PGM3O95394 542 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 POLR3DP05423 398 aaPredicted RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 RARGP13631 454 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 FDPSP14324 419 aaKnown RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 FOSBP53539 338 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 NR1H2P55055 460 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 P2RX3P56373 397 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 PPP2R5CQ13362 524 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 TXNRD1Q16881 649 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 EDRF1Q3B7T1 1238 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 TIGD2Q4W5G0 525 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 DCAF6Q58WW2 860 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 TTC39AQ5SRH9 613 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 CHCHD4Q8N4Q1 142 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 TTLL11Q8NHH1 800 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 FRS2Q8WU20 508 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 MS4A14Q96JA4 679 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 MAGEB18Q96M61 343 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 MIPEPQ99797 713 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 BTBD10Q9BSF8 475 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 CALN1Q9BXU9 219 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 MRPL1Q9BYD6 325 aaKnown RBP10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 MUC3BQ9H195 1237 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 RUBCNLQ9H714 662 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 ZNF696Q9H7X3 374 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 SIAEQ9HAT2 523 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 GPAMQ9HCL2 828 aa10.95□□□□□ -0.66
PRPF4B-206ENST00000481109 RIC8AQ9NPQ8 531 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms