RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 YARSP54577 528 aaKnown RBP20.67■□□□□ 0.9
ABCF3-214ENST00000480562 SOX4Q06945 474 aaPredicted RBP20.67■□□□□ 0.9
ABCF3-214ENST00000480562 UPP1Q16831 310 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 C1orf186Q6ZWK4 172 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 CCDC105Q8IYK2 499 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 SLC7A14Q8TBB6 771 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 GPR152Q8TDT2 470 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 DRC1Q96MC2 740 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 RTP3Q9BQQ7 232 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 RPP25Q9BUL9 199 aaKnown RBP20.67■□□□□ 0.9
ABCF3-214ENST00000480562 CCDC94Q9BW85 323 aaPredicted RBP20.67■□□□□ 0.9
ABCF3-214ENST00000480562 MRPL4Q9BYD3 311 aaKnown RBP20.67■□□□□ 0.9
ABCF3-214ENST00000480562 TMEM134Q9H6X4 195 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 ARHGAP28Q9P2N2 729 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 MTRRQ9UBK8 725 aa20.67■□□□□ 0.9
ABCF3-214ENST00000480562 PROB1E7EW31 1015 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 SLC16A4O15374 487 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 PRPHP41219 470 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 NBL1P41271 181 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 AXDND1Q5T1B0 1012 aaPredicted RBP20.66■□□□□ 0.9
ABCF3-214ENST00000480562 ASCL5Q7RTU5 278 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 FRMD5Q7Z6J6 570 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 DTWD2Q8NBA8 298 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 UROC1Q96N76 676 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 ZMAT2Q96NC0 199 aaKnown RBP20.66■□□□□ 0.9
ABCF3-214ENST00000480562 TCHPQ9BT92 498 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 CDY1Q9Y6F8 540 aa20.66■□□□□ 0.9
ABCF3-214ENST00000480562 XYLBO75191 536 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 HARSP12081 509 aaKnown RBP20.65■□□□□ 0.9
ABCF3-214ENST00000480562 RFX1P22670 979 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 RAD51AP2Q09MP3 1159 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 XKR4Q5GH76 650 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 ALKAL1Q6UXT8 129 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 ITFG1Q8TB96 612 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 FGF14Q92915 247 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 DDX27Q96GQ7 796 aaKnown RBP20.65■□□□□ 0.9
ABCF3-214ENST00000480562 ZBTB45Q96K62 511 aaPredicted RBP20.65■□□□□ 0.9
ABCF3-214ENST00000480562 PLIN2Q99541 437 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 TBC1D17Q9HA65 648 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 TOPORSQ9NS56 1045 aaPredicted RBP20.65■□□□□ 0.9
ABCF3-214ENST00000480562 HCFC1R1Q9NWW0 138 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 CDH7Q9ULB5 785 aa20.65■□□□□ 0.9
ABCF3-214ENST00000480562 ABLIM1O14639 778 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 TRAPPC3O43617 180 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 HOXA9P31269 272 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 RABEP1Q15276 862 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 PARM1Q6UWI2 310 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 FGF13Q92913 245 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 SNX27Q96L92 541 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 ACAP3Q96P50 834 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 PNMA5Q96PV4 448 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 DAXXQ9UER7 740 aaPredicted RBP20.64■□□□□ 0.89
ABCF3-214ENST00000480562 KIF3AQ9Y496 699 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 RBM19Q9Y4C8 960 aaKnown RBP20.64■□□□□ 0.89
ABCF3-214ENST00000480562 BACE2Q9Y5Z0 518 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 ZFP37Q9Y6Q3 630 aaPredicted RBP20.64■□□□□ 0.89
ABCF3-214ENST00000480562 CFAP54Q96N23 3096 aa20.64■□□□□ 0.89
ABCF3-214ENST00000480562 VPS13AQ96RL7 3174 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 PODXLO00592 558 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 MEFVO15553 781 aaPredicted RBP20.63■□□□□ 0.89
ABCF3-214ENST00000480562 MCF2P10911 925 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 PROZP22891 400 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 ATP2C1P98194 919 aaPredicted RBP20.63■□□□□ 0.89
ABCF3-214ENST00000480562 ANGPT1Q15389 498 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 UVSSAQ2YD98 709 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 RILPL1Q5EBL4 403 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 MPZL3Q6UWV2 235 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 ANKS3Q6ZW76 656 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 C18orf25Q96B23 403 aaPredicted RBP20.63■□□□□ 0.89
ABCF3-214ENST00000480562 C17orf75Q9HAS0 396 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 ARHGEF3Q9NR81 526 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 SLC38A7Q9NVC3 462 aa20.63■□□□□ 0.89
ABCF3-214ENST00000480562 DNMT3BQ9UBC3 853 aaKnown RBP20.63■□□□□ 0.89
ABCF3-214ENST00000480562 DMDP11532 3685 aa20.62■□□□□ 0.89
ABCF3-214ENST00000480562 VWA3AA6NCI4 1184 aa20.62■□□□□ 0.89
ABCF3-214ENST00000480562 PRR23AA6NEV1 266 aa20.62■□□□□ 0.89
ABCF3-214ENST00000480562 KCNE1P15382 129 aa20.62■□□□□ 0.89
ABCF3-214ENST00000480562 GUCY2CP25092 1073 aa20.62■□□□□ 0.89
ABCF3-214ENST00000480562 SEZ6Q53EL9 994 aa20.62■□□□□ 0.89
ABCF3-214ENST00000480562 TMX3Q96JJ7 454 aa20.62■□□□□ 0.89
ABCF3-214ENST00000480562 SLC2A4RGQ9NR83 387 aa20.62■□□□□ 0.89
ABCF3-214ENST00000480562 ANKFY1Q9P2R3 1169 aa20.62■□□□□ 0.89
ABCF3-214ENST00000480562 PTPRZ1P23471 2315 aaPredicted RBP20.62■□□□□ 0.89
ABCF3-214ENST00000480562 CD2BP2O95400 341 aaKnown RBP20.61■□□□□ 0.89
ABCF3-214ENST00000480562 POU2F2P09086 479 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 GPC5P78333 572 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 STRN3Q13033 797 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 PABPC1LQ4VXU2 614 aaKnown RBP20.61■□□□□ 0.89
ABCF3-214ENST00000480562 SPECC1Q5M775 1068 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 VARS2Q5ST30 1063 aaKnown RBP20.61■□□□□ 0.89
ABCF3-214ENST00000480562 HYIQ5T013 277 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 SYT2Q8N9I0 419 aaPredicted RBP20.61■□□□□ 0.89
ABCF3-214ENST00000480562 TMEM161BQ8NDZ6 487 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 SPIRE2Q8WWL2 714 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 ING5Q8WYH8 240 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 NTPCRQ9BSD7 190 aaKnown RBP20.61■□□□□ 0.89
ABCF3-214ENST00000480562 TIPINQ9BVW5 301 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 CNTN3Q9P232 1028 aa20.61■□□□□ 0.89
ABCF3-214ENST00000480562 RIF1Q5UIP0 2472 aaKnown RBP20.61■□□□□ 0.89
ABCF3-214ENST00000480562 NOTCH4Q99466 2003 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms