RNA–Protein interactions for RNA: ENST00000480205.5

PSMD6-208, Transcript of proteasome 26S subunit, non-ATPase 6, human

TSL 3

Gene PSMD6, Length 657 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD6-208	ENST00000480205	RIF1	Q5UIP0	2472 aa	Known RBP	6.11	□□□□□ -1.43
PSMD6-208	ENST00000480205	CACNA1B	Q00975	2339 aa		6.11	□□□□□ -1.43
PSMD6-208	ENST00000480205	ADAMTS20	P59510	1910 aa		6.11	□□□□□ -1.43
PSMD6-208	ENST00000480205	ZNFX1	Q9P2E3	1918 aa	Known RBP	6.11	□□□□□ -1.43
PSMD6-208	ENST00000480205	TET1	Q8NFU7	2136 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	EPG5	Q9HCE0	2579 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	PTPRS	Q13332	1948 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	WDR46	O15213	610 aa	Known RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	FGF10	O15520	208 aa	Predicted RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	MPO	P05164	745 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	ALAD	P13716	330 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	VIPR1	P32241	457 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	YBX1	P67809	324 aa	Known RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	POU4F1	Q01851	419 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	FSCN1	Q16658	493 aa	Known RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	TNNI3K	Q59H18	835 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	HLA-DQA1	Q5Y7H0	255 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	SNRNP48	Q6IEG0	339 aa	Known RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	CYP2R1	Q6VVX0	501 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	NOL8	Q76FK4	1167 aa	Known RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	ADAT2	Q7Z6V5	191 aa	Known RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	TLK2	Q86UE8	772 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	TMEM151B	Q8IW70	566 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	FAM169B	Q8N8A8	192 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	SDR42E1	Q8WUS8	393 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	PDGFC	Q9NRA1	345 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	SMC4	Q9NTJ3	1288 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	SIRT5	Q9NXA8	310 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	MCM9	Q9NXL9	1143 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	MBD1	Q9UIS9	605 aa	Predicted RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	DBNL	Q9UJU6	430 aa	Known RBP	6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	TNN	Q9UQP3	1299 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	TMX2	Q9Y320	296 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	FPGT-TNNI3K	V9GXZ4	949 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	GVINP1	Q7Z2Y8	2422 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	MYO7A	Q13402	2215 aa		6.1	□□□□□ -1.43
PSMD6-208	ENST00000480205	NAV1	Q8NEY1	1877 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	ZNF536	O15090	1300 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	TNKS	O95271	1327 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205		A0A1W2PQ27	194 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205		A0A1W2PQ64	194 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205		A0A1W2PQC6	194 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205		A0A1W2PQD8	194 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	PRKAB2	O43741	272 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	CHGB	P05060	677 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	EEF2	P13639	858 aa	Known RBP	6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	NKX3-2	P78367	333 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	NFKB2	Q00653	900 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	TNFAIP2	Q03169	654 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	MVK	Q03426	396 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	MTX1	Q13505	466 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	GPNMB	Q14956	572 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	CLUL1	Q15846	466 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	TMEM179	Q6ZVK1	233 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	EEPD1	Q7L9B9	569 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	JAML	Q86YT9	394 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	FBXO16	Q8IX29	292 aa	Predicted RBP	6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	CPXCR1	Q8N123	301 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	LCORL	Q8N3X6	602 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	ANAPC16	Q96DE5	110 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	DDX11	Q96FC9	970 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	PTCHD1	Q96NR3	888 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	MCMBP	Q9BTE3	642 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	TEX13B	Q9BXU2	312 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	SPC25	Q9HBM1	224 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	RAVER2	Q9HCJ3	691 aa	Known RBP	6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	TNFRSF12A	Q9NP84	129 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	HOMER2	Q9NSB8	354 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	KLHL14	Q9P2G3	628 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	STRIP2	Q9ULQ0	834 aa		6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	NOB1	Q9ULX3	412 aa	Known RBP	6.09	□□□□□ -1.43
PSMD6-208	ENST00000480205	LINC01553	A4QN01	128 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	OTOL1	A6NHN0	477 aa	Predicted RBP	6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	NUDT19	A8MXV4	375 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	ABLIM1	O14639	778 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	PPM1B	O75688	479 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	MSL3P1	P0C860	447 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	ATF4	P18848	351 aa	Predicted RBP	6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	VCP	P55072	806 aa	Known RBP	6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	WDR5	P61964	334 aa	Known RBP	6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	KIAA1211L	Q6NV74	962 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	VHLL	Q6RSH7	139 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	RPUSD2	Q8IZ73	545 aa	Known RBP	6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	MSL3	Q8N5Y2	521 aa	Known RBP	6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	NEK9	Q8TD19	979 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	PANK1	Q8TE04	598 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	SLF1	Q9BQI6	1058 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	C17orf80	Q9BSJ5	609 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	FTO	Q9C0B1	505 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	CCDC8	Q9H0W5	538 aa	Predicted RBP	6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	ABHD16B	Q9H3Z7	469 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	CNTD2	Q9H8S5	307 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	FAM186A	A6NE01	2351 aa		6.08	□□□□□ -1.44
PSMD6-208	ENST00000480205	COL4A6	Q14031	1691 aa		6.07	□□□□□ -1.44
PSMD6-208	ENST00000480205	AURKA	O14965	403 aa		6.07	□□□□□ -1.44
PSMD6-208	ENST00000480205	CSPG5	O95196	566 aa		6.07	□□□□□ -1.44
PSMD6-208	ENST00000480205	NDUFB10	O96000	172 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms