RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 H2AFVQ71UI9 128 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 CEP112Q8N8E3 955 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 OLIG1Q8TAK6 271 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 LNX1Q8TBB1 728 aaPredicted RBP11.86□□□□□ -0.51
VTI1A-204ENST00000480057 ZBTB10Q96DT7 871 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 SCLT1Q96NL6 688 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 ADPGKQ9BRR6 497 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 IMPG2Q9BZV3 1241 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 NOCTQ9UK39 431 aaKnown RBP11.86□□□□□ -0.51
VTI1A-204ENST00000480057 GABRQQ9UN88 632 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 CNTN6Q9UQ52 1028 aa11.86□□□□□ -0.51
VTI1A-204ENST00000480057 MACROD2A1Z1Q3 448 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 GPR25O00155 361 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 AOC2O75106 756 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 ASS1P00966 412 aaKnown RBP11.85□□□□□ -0.51
VTI1A-204ENST00000480057 TMEM253P0C7T8 217 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 PNMA6AP0CW24 399 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-204ENST00000480057 RARBP10826 455 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 GZMAP12544 262 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 DARSP14868 501 aaKnown RBP11.85□□□□□ -0.51
VTI1A-204ENST00000480057 GRM5P41594 1212 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 CUL2Q13617 745 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 NCOA4Q13772 614 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 ENOX2Q16206 610 aaKnown RBP11.85□□□□□ -0.51
VTI1A-204ENST00000480057 SGSM1Q2NKQ1 1148 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 PPP1R2P3Q6NXS1 205 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 TRAPPC11Q7Z392 1133 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 SESTD1Q86VW0 696 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 C7orf31Q8N865 590 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 OR5B17Q8NGF7 314 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 EPS8L1Q8TE68 723 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 LENG1Q96BZ8 264 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-204ENST00000480057 ANKRD36BP1Q96IX9 119 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 TSPAN18Q96SJ8 248 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 ARHGAP39Q9C0H5 1083 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 FAM124BQ9H5Z6 455 aaPredicted RBP11.85□□□□□ -0.51
VTI1A-204ENST00000480057 PLEKHA5Q9HAU0 1116 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 DERAQ9Y315 318 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 PCDHGC5Q9Y5F6 944 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 THSD7BQ9C0I4 1608 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 ANK1P16157 1881 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 NCANO14594 1321 aa11.85□□□□□ -0.51
VTI1A-204ENST00000480057 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 EFCAB8A8MWE9 144 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-204ENST00000480057 TBC1D8O95759 1140 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 C6orf222P0C671 652 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-204ENST00000480057 TMEM191BP0C7N4 346 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 STAG3L1P0CL83 205 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 CYP11B1P15538 503 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 PDE6CP51160 858 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 CRYBB1P53674 252 aaPredicted RBP11.84□□□□□ -0.51
VTI1A-204ENST00000480057 HADHBP55084 474 aaKnown RBP11.84□□□□□ -0.51
VTI1A-204ENST00000480057 PRMT2P55345 433 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 BEX3Q00994 111 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 CDR2Q01850 454 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 ARHGEF6Q15052 776 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 GNASQ5JWF2 1037 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 RPAINQ86UA6 219 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 GLYCTKQ8IVS8 523 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 THNSL1Q8IYQ7 743 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 MNS1Q8NEH6 495 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 PXYLP1Q8TE99 480 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 U2AF1L4Q8WU68 220 aaKnown RBP11.84□□□□□ -0.51
VTI1A-204ENST00000480057 KAT5Q92993 513 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 TATDN2Q93075 761 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 ISCUQ9H1K1 167 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 SRRDQ9UH36 339 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 TFR2Q9UP52 801 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 C2CD2Q9Y426 696 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 PCDHB2Q9Y5E7 798 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 CAPN6Q9Y6Q1 641 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 DUSP10Q9Y6W6 482 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 SCN10AQ9Y5Y9 1956 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 RALGAPA2Q2PPJ7 1873 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 MROH7Q68CQ1 1323 aa11.84□□□□□ -0.51
VTI1A-204ENST00000480057 CYP26A1O43174 497 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 ADAMTS4O75173 837 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 RTN2O75298 545 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 MOCS3O95396 460 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 STAU1O95793 577 aaKnown RBP11.83□□□□□ -0.52
VTI1A-204ENST00000480057 HMGCRP04035 888 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 TCP1P17987 556 aaKnown RBP11.83□□□□□ -0.52
VTI1A-204ENST00000480057 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
VTI1A-204ENST00000480057 EIF4BP23588 611 aaKnown RBP11.83□□□□□ -0.52
VTI1A-204ENST00000480057 ATICP31939 592 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 GALCP54803 685 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 YWHAEP62258 255 aaKnown RBP11.83□□□□□ -0.52
VTI1A-204ENST00000480057 NOP14P78316 857 aaKnown RBP11.83□□□□□ -0.52
VTI1A-204ENST00000480057 CKAP4Q07065 602 aaKnown RBP11.83□□□□□ -0.52
VTI1A-204ENST00000480057 CACNB2Q08289 660 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-204ENST00000480057 TRPC3Q13507 836 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 SEZ6Q53EL9 994 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 MAP3K21Q5TCX8 1036 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 LMBRD2Q68DH5 695 aaPredicted RBP11.83□□□□□ -0.52
VTI1A-204ENST00000480057 NOTUMQ6P988 496 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 SLC27A1Q6PCB7 646 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 TRIM72Q6ZMU5 477 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 RUFY4Q6ZNE9 571 aa11.83□□□□□ -0.52
VTI1A-204ENST00000480057 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms