RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PTPRJQ12913 1337 aa13.59□□□□□ -0.23
TRAPPC12-218ENST00000479897 KIAA1671Q9BY89 1806 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 A0A1B0GTH6 734 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 GTPBP10A4D1E9 387 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 NFICP08651 508 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 TRIM49P0CI25 452 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 TRIM49CP0CI26 452 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 CDK11BP21127 795 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 COPB1P53618 953 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 TMEM132DQ14C87 1099 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 NAB2Q15742 525 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 ZACNQ401N2 412 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 DCAF17Q5H9S7 520 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 JADE1Q6IE81 842 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 OTOP2Q7RTS6 562 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 RNF169Q8NCN4 708 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 PHOSPHO2Q8TCD6 241 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 CCDC127Q96BQ5 260 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 ZNF689Q96CS4 500 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 ZFP42Q96MM3 310 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 ZMAT2Q96NC0 199 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 GAD1Q99259 594 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 MRPL9Q9BYD2 267 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 TMEM8AQ9HCN3 771 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 SLC38A7Q9NVC3 462 aa13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 UBQLN1Q9UMX0 589 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-218ENST00000479897 LGALS16A8MUM7 142 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 DGKIO75912 1065 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 TPM2P07951 284 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 TMEM191BP0C7N4 346 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 FGFR1P11362 822 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 TNNI1P19237 187 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 FMO5P49326 533 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 MXI1P50539 228 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 SCNN1GP51170 649 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 FANCCQ00597 558 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 PPP3CAQ08209 521 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 VWA3BQ502W6 1294 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 NOMO2Q5JPE7 1267 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 TCERG1LQ5VWI1 586 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 KRT39Q6A163 491 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 URGCPQ8TCY9 931 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 HELQQ8TDG4 1101 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 ANKRD36BP1Q96IX9 119 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 CASD1Q96PB1 797 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 CXCL16Q9H2A7 254 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 NDST4Q9H3R1 872 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 TAB2Q9NYJ8 693 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 KLK14Q9P0G3 267 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 CXXC1Q9P0U4 656 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 KANSL3Q9P2N6 904 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 PLAGL2Q9UPG8 496 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 COQ4Q9Y3A0 265 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 GBF1Q92538 1859 aa13.57□□□□□ -0.24
TRAPPC12-218ENST00000479897 ZBBXA8MT70 800 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 GJB5O95377 273 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 C4BPAP04003 597 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 THP07101 528 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 LRPAP1P30533 357 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 BMP8BP34820 402 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 HTRA4P83105 476 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 DSC1Q08554 894 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 DUOXA2Q1HG44 320 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 SV2AQ7L0J3 742 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 ABI1Q8IZP0 508 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 LRRC43Q8N309 656 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 BEST2Q8NFU1 509 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 OR5B17Q8NGF7 314 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 CXorf38Q8TB03 319 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 ZNF516Q92618 1163 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 POP1Q99575 1024 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 TBC1D13Q9NVG8 400 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 ITGA11Q9UKX5 1188 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
TRAPPC12-218ENST00000479897 TNRC18O15417 2968 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 CARNS1A5YM72 827 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 GOLGA6L3A6NEY3 463 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 H0YGN5 161 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 SERPINC1P01008 464 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 TNNC2P02585 160 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 GCLMP48507 274 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 AFF1P51825 1210 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 TFAMQ00059 246 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 MYL7Q01449 175 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 TUSC3Q13454 348 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 FILIP1LQ4L180 1135 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 CBWD6Q4V339 395 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
TRAPPC12-218ENST00000479897 CBWD3Q5JTY5 395 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms