RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 FAM170BA6NMN3 283 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 ZBTB39O15060 712 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 ATMINO43313 823 aaPredicted RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 LAMTOR5O43504 91 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 TSPAN1O60635 241 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 CTDNEP1O95476 244 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 C1RP00736 705 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 SRGAP2CP0DJJ0 459 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 ITGA4P13612 1032 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 NASPP49321 788 aaPredicted RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 HMGN5P82970 282 aaKnown RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 CYP4A11Q02928 519 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 NR5A1Q13285 461 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 CTTNQ14247 550 aaKnown RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 MXD4Q14582 209 aaPredicted RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 UBXN2BQ14CS0 331 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 SLC44A4Q53GD3 710 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 FUT10Q6P4F1 479 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 CCDC83Q8IWF9 413 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 CNNM3Q8NE01 707 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 NSUN7Q8NE18 718 aaKnown RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 FGF13Q92913 245 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 CLDN23Q96B33 292 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 CPB2Q96IY4 423 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 KXD1Q9BQD3 176 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 EIF2AK1Q9BQI3 630 aaKnown RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 CLSTN3Q9BQT9 956 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 LLPHQ9BRT6 129 aaKnown RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 PLA2G2FQ9BZM2 168 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 NXF3Q9H4D5 531 aaKnown RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 TTC12Q9H892 705 aaPredicted RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 PIDD1Q9HB75 910 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 UBN1Q9NPG3 1134 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 XPNPEP1Q9NQW7 623 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 PRMT8Q9NR22 394 aaPredicted RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 SH2B1Q9NRF2 756 aaPredicted RBP7.35□□□□□ -1.23
VCP-205ENST00000479300 GJB4Q9NTQ9 266 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 ANKEF1Q9NU02 776 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 HCFC1R1Q9NWW0 138 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 FAM13BQ9NYF5 915 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 FNIP2Q9P278 1114 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 KANSL3Q9P2N6 904 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 FBXW11Q9UKB1 542 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 VAV3Q9UKW4 847 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 PCDHGA2Q9Y5H1 932 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 VWA8A3KMH1 1905 aa7.35□□□□□ -1.23
VCP-205ENST00000479300 ZFYVE26Q68DK2 2539 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 BTBD18B2RXH4 712 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 B4GALT5O43286 388 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 JAK2O60674 1132 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 NR1I2O75469 434 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 SEC24BO95487 1268 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 ADRB1P08588 477 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 FDPSP14324 419 aaKnown RBP7.34□□□□□ -1.23
VCP-205ENST00000479300 AKAP5P24588 427 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 AXLP30530 894 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 MCM7P33993 719 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 GUCY1B3Q02153 619 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 ORC2Q13416 577 aaPredicted RBP7.34□□□□□ -1.23
VCP-205ENST00000479300 EMC2Q15006 297 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 PCBP1Q15365 356 aaKnown RBP eCLIP7.34□□□□□ -1.236e-7■■■■□ 25.9
VCP-205ENST00000479300 ST3GAL2Q16842 350 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 SLC5A9Q2M3M2 681 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 TMEM92Q6UXU6 159 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 FERMT3Q86UX7 667 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 CDR2LQ86X02 465 aaPredicted RBP7.34□□□□□ -1.23
VCP-205ENST00000479300 HSCBQ8IWL3 235 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 NPAS3Q8IXF0 933 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 GPR65Q8IYL9 337 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 RNF149Q8NC42 400 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 LNX1Q8TBB1 728 aaPredicted RBP7.34□□□□□ -1.23
VCP-205ENST00000479300 HASPINQ8TF76 798 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 HAS1Q92839 578 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 SNX21Q969T3 373 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 APOL6Q9BWW8 343 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 BCO2Q9BYV7 579 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 OSBPL6Q9BZF3 934 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 RAB34Q9BZG1 259 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 TRIM6Q9C030 488 aaPredicted RBP7.34□□□□□ -1.23
VCP-205ENST00000479300 ZSCAN32Q9NX65 697 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 RGL1Q9NZL6 768 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 ADAM28Q9UKQ2 775 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 SSX2IPQ9Y2D8 614 aa7.34□□□□□ -1.23
VCP-205ENST00000479300 R3HCC1Q9Y3T6 440 aaKnown RBP7.34□□□□□ -1.23
VCP-205ENST00000479300 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.34□□□□□ -1.23
VCP-205ENST00000479300 ATRXP46100 2492 aa7.34□□□□□ -1.24
VCP-205ENST00000479300 SPEGQ15772 3267 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 INO80B-WBP1J3KQ70 363 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 PTGESO14684 152 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 CCL16O15467 120 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 DTNBO60941 627 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 DGAT1O75907 488 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 SLITRK3O94933 977 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 KIF4AO95239 1232 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 LARGE1O95461 756 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 C8AP07357 584 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 ARF4P18085 180 aaPredicted RBP7.33□□□□□ -1.24
VCP-205ENST00000479300 FCARP24071 287 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 HOXC13P31276 330 aa7.33□□□□□ -1.24
VCP-205ENST00000479300 RBM25P49756 843 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms