RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 ELAVL2Q12926 359 aaKnown RBP12.15□□□□□ -0.46
HDLBP-237ENST00000479169 PRPF4BQ13523 1007 aaKnown RBP12.15□□□□□ -0.46
HDLBP-237ENST00000479169 MAPK6Q16659 721 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 ZBTB41Q5SVQ8 909 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 CD300LGQ6UXG3 332 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 ATRIPQ8WXE1 791 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
HDLBP-237ENST00000479169 MTMR9Q96QG7 549 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 KIFC3Q9BVG8 833 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 OSBPL6Q9BZF3 934 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 CCDC113Q9H0I3 377 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 GOLGA2P5Q9HBQ8 144 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 HEBP1Q9NRV9 189 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 MTRRQ9UBK8 725 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 SMG5Q9UPR3 1016 aaKnown RBP12.15□□□□□ -0.46
HDLBP-237ENST00000479169 MRPS23Q9Y3D9 190 aaKnown RBP12.15□□□□□ -0.46
HDLBP-237ENST00000479169 PCDHGA2Q9Y5H1 932 aa12.15□□□□□ -0.46
HDLBP-237ENST00000479169 KMT2BQ9UMN6 2715 aaPredicted RBP12.15□□□□□ -0.47
HDLBP-237ENST00000479169 SDK1Q7Z5N4 2213 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 SHISA7A6NL88 538 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 BTBD18B2RXH4 712 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 EPB41L2O43491 1005 aaKnown RBP12.14□□□□□ -0.47
HDLBP-237ENST00000479169 B3GAT3O94766 335 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 LARGE1O95461 756 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 XRCC6P12956 609 aaKnown RBP eCLIP12.14□□□□□ -0.47
HDLBP-237ENST00000479169 BRCC3P46736 316 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 CLCNKBP51801 687 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 TANGO2Q6ICL3 276 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 PDXDC1Q6P996 788 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 CATSPER3Q86XQ3 398 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 ZBTB44Q8NCP5 570 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 C3orf58Q8NDZ4 430 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 MCPH1Q8NEM0 835 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 CLDN23Q96B33 292 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 CNTNAP3BQ96NU0 1288 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 ADPGKQ9BRR6 497 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 C2orf40Q9H1Z8 148 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 POLD4Q9HCU8 107 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 ZSCAN32Q9NX65 697 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 KCNH3Q9ULD8 1083 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 CHD8Q9HCK8 2581 aa12.14□□□□□ -0.47
HDLBP-237ENST00000479169 CNOT1A5YKK6 2376 aaKnown RBP12.13□□□□□ -0.47
HDLBP-237ENST00000479169 TMEM189-UBE2V1I3L0A0 370 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 ACKR2O00590 384 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 NRG2O14511 850 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-237ENST00000479169 ECI2O75521 394 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 MAGEA9P43362 315 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 ATXN1P54253 815 aaKnown RBP12.13□□□□□ -0.47
HDLBP-237ENST00000479169 FZD5Q13467 585 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 GRM2Q14416 872 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 NT5DC1Q5TFE4 455 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 DIS3L2Q8IYB7 885 aaKnown RBP12.13□□□□□ -0.47
HDLBP-237ENST00000479169 DEPTORQ8TB45 409 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 WASF1Q92558 559 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 NELL1Q92832 810 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 TCEAL4Q96EI5 215 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 PPP1R10Q96QC0 940 aaKnown RBP12.13□□□□□ -0.47
HDLBP-237ENST00000479169 EPC1Q9H2F5 836 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 TUFT1Q9NNX1 390 aa12.13□□□□□ -0.47
HDLBP-237ENST00000479169 PRMT8Q9NR22 394 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-237ENST00000479169 ARHGEF35A5YM69 484 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 LILRB5O75023 590 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 KRT37O76014 449 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 FCARP24071 287 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 MCM7P33993 719 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 NAMPTP43490 491 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 RBM25P49756 843 aaKnown RBP12.12□□□□□ -0.47
HDLBP-237ENST00000479169 ROR1Q01973 937 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 SOX4Q06945 474 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-237ENST00000479169 MTAPQ13126 283 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 UPP1Q16831 310 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 DCAF4L1Q3SXM0 396 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 ZNF852Q6ZMS4 543 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 ANKS3Q6ZW76 656 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 CEP120Q8N960 986 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 PARD6AQ9NPB6 346 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 GDE1Q9NZC3 331 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 USP18Q9UMW8 372 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 NDRG2Q9UN36 371 aaKnown RBP12.12□□□□□ -0.47
HDLBP-237ENST00000479169 BACE2Q9Y5Z0 518 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 MYH11P35749 1972 aa12.12□□□□□ -0.47
HDLBP-237ENST00000479169 KIF26AQ9ULI4 1882 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-237ENST00000479169 ARHGEF37A1IGU5 675 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 WDR27A2RRH5 827 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 PRRG1O14668 218 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 JAK2O60674 1132 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 LRG1P02750 347 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 CYP11B2P19099 503 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 TGM1P22735 817 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 CCR2P41597 374 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 RPS9P46781 194 aaKnown RBP12.11□□□□□ -0.47
HDLBP-237ENST00000479169 ARPP19P56211 112 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 ADCY1Q08828 1119 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 LPAL2Q16609 132 aa12.11□□□□□ -0.47
HDLBP-237ENST00000479169 ME3Q16798 604 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms