RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 WDR49Q8IV35 697 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 TMEM199Q8N511 208 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 C18orf25Q96B23 403 aaPredicted RBP14.2□□□□□ -0.14
CHD3-210ENST00000479080 FAM212AQ96EL1 285 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 GAD1Q99259 594 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 MTMR12Q9C0I1 747 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 ASB7Q9H672 318 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 SIX2Q9NPC8 291 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 C1orf112Q9NSG2 853 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 TUBGCP4Q9UGJ1 667 aa14.2□□□□□ -0.14
CHD3-210ENST00000479080 AJAP1Q9UKB5 411 aaPredicted RBP14.2□□□□□ -0.14
CHD3-210ENST00000479080 PDCD11Q14690 1871 aaKnown RBP14.19□□□□□ -0.14
CHD3-210ENST00000479080 SMIM28A0A1B0GU29 152 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 PPEF2O14830 753 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 PMM2O15305 246 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 EVI5O60447 810 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 OFD1O75665 1012 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 ADCY5O95622 1261 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 SCNN1GP51170 649 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 WDR5P61964 334 aaKnown RBP14.19□□□□□ -0.14
CHD3-210ENST00000479080 PLCB2Q00722 1185 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 PPP2R3AQ06190 1150 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 TMEM240Q5SV17 173 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 APBB1IPQ7Z5R6 666 aaPredicted RBP14.19□□□□□ -0.14
CHD3-210ENST00000479080 TMCO2Q7Z6W1 182 aaPredicted RBP14.19□□□□□ -0.14
CHD3-210ENST00000479080 C1orf127Q8N9H9 656 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 RNF169Q8NCN4 708 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 TAS1R2Q8TE23 839 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 PPP1R10Q96QC0 940 aaKnown RBP14.19□□□□□ -0.14
CHD3-210ENST00000479080 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.19□□□□□ -0.142e-8■■■■□ 19.4
CHD3-210ENST00000479080 ELAC1Q9H777 363 aaKnown RBP14.19□□□□□ -0.14
CHD3-210ENST00000479080 PLEKHA5Q9HAU0 1116 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 RC3H2Q9HBD1 1191 aaKnown RBP14.19□□□□□ -0.14
CHD3-210ENST00000479080 TMEM8AQ9HCN3 771 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 TMEM161AQ9NX61 479 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 HCSTQ9UBK5 93 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 CACNG4Q9UBN1 327 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 GIT1Q9Y2X7 761 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 COQ4Q9Y3A0 265 aa14.19□□□□□ -0.14
CHD3-210ENST00000479080 ARL5CA6NH57 179 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 PFKMP08237 780 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 SLC9A1P19634 815 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 GTF2H1P32780 548 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 MXI1P50539 228 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 MYL7Q01449 175 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 FPGSQ05932 587 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 SYCP1Q15431 976 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 ZNF365Q70YC5 407 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 TRAPPC11Q7Z392 1133 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 VSTM4Q8IW00 320 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 HELQQ8TDG4 1101 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 KIF12Q96FN5 646 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 MRFAP1L1Q96HT8 127 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 ERGIC2Q96RQ1 377 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 FNBP1Q96RU3 617 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 CRACR2AQ9BSW2 395 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 TRIM5Q9C035 493 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 RSAD1Q9HA92 442 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 GOLGA2P5Q9HBQ8 144 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 CXXC1Q9P0U4 656 aaPredicted RBP14.18□□□□□ -0.14
CHD3-210ENST00000479080 C2CD2Q9Y426 696 aa14.18□□□□□ -0.14
CHD3-210ENST00000479080 RNF225M0QZC1 329 aaPredicted RBP14.17□□□□□ -0.14
CHD3-210ENST00000479080 NOL4O94818 638 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 EOMESO95936 686 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 CST3P01034 146 aaPredicted RBP14.17□□□□□ -0.14
CHD3-210ENST00000479080 HLA-DRAP01903 254 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 ACTN1P12814 892 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 TNNI1P19237 187 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 YARSP54577 528 aaKnown RBP14.17□□□□□ -0.14
CHD3-210ENST00000479080 TFAMQ00059 246 aaKnown RBP14.17□□□□□ -0.14
CHD3-210ENST00000479080 UBXN1Q04323 297 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 PPIGQ13427 754 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHD3-210ENST00000479080 TMEM132DQ14C87 1099 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 SURF1Q15526 300 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 KRT39Q6A163 491 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 CD302Q8IX05 232 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 ANKRD20A12PQ8NF67 263 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 CASD1Q96PB1 797 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 TTYH3Q9C0H2 523 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 INTS2Q9H0H0 1204 aaKnown RBP14.17□□□□□ -0.14
CHD3-210ENST00000479080 GANQ9H2C0 597 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 APOBEC3GQ9HC16 384 aaKnown RBP14.17□□□□□ -0.14
CHD3-210ENST00000479080 DERAQ9Y315 318 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 TTC3P53804 2025 aa14.17□□□□□ -0.14
CHD3-210ENST00000479080 ABHD14A-ACY1A0A1B0GW23 586 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 A0A1W2PQC6 194 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 GTPBP10A4D1E9 387 aaKnown RBP14.16□□□□□ -0.14
CHD3-210ENST00000479080 POMCP01189 267 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 SKIP12755 728 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 PON1P27169 355 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 IKBKEQ14164 716 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 SPOPLQ6IQ16 392 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 GJB7Q6PEY0 223 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 CD300LGQ6UXG3 332 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 FAM43BQ6ZT52 329 aaPredicted RBP14.16□□□□□ -0.14
CHD3-210ENST00000479080 OTOP2Q7RTS6 562 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 NPAS4Q8IUM7 802 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 ARHGEF19Q8IW93 802 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 DPF3Q92784 378 aa14.16□□□□□ -0.14
CHD3-210ENST00000479080 PGBD4Q96DM1 585 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms