RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ESRRAP11474 423 aaPredicted RBP22.53■■□□□ 1.2
SDF4-206ENST00000478938 PCSK6P29122 969 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 KRT17Q04695 432 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 MAML1Q92585 1016 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 TRAF3IP3Q9Y228 551 aa22.53■■□□□ 1.2
SDF4-206ENST00000478938 ZBED4O75132 1171 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 PDE5AO76074 875 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 SMIM18P0DKX4 95 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 IDO1P14902 403 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 YY1P25490 414 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 DLG1Q12959 904 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 HNRNPDQ14103 355 aaKnown RBP22.52■■□□□ 1.2
SDF4-206ENST00000478938 CLUL1Q15846 466 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 FAM26FQ5R3K3 315 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 C1orf228Q6PIY5 440 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 PDSS2Q86YH6 399 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 FBXO27Q8NI29 283 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 FNDC8Q8TC99 324 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 RAD54LQ92698 747 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 C9orf72Q96LT7 481 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 PANX3Q96QZ0 392 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 NUDT12Q9BQG2 462 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 STK33Q9BYT3 514 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 ADAM33Q9BZ11 813 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.52■■□□□ 1.21e-8■■■■■ 43.5
SDF4-206ENST00000478938 AXIN2Q9Y2T1 843 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 ATAD5Q96QE3 1844 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 C1orf167Q5SNV9 1468 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 PHRF1Q9P1Y6 1649 aaKnown RBP22.52■■□□□ 1.2
SDF4-206ENST00000478938 SCN11AQ9UI33 1791 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 POLD1P28340 1107 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 TTC7BQ86TV6 843 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 TRABD2AQ86V40 505 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 SLC30A5Q8TAD4 765 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 ZNF75CPQ92670 426 aaPredicted RBP22.52■■□□□ 1.2
SDF4-206ENST00000478938 EURLQ9NYK6 297 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 NDUFA13Q9P0J0 144 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 STK17AQ9UEE5 414 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 CASZ1Q86V15 1759 aa22.52■■□□□ 1.2
SDF4-206ENST00000478938 WDR91A4D1P6 747 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 HTR3EA5X5Y0 456 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 PORP16435 677 aaPredicted RBP22.51■■□□□ 1.19
SDF4-206ENST00000478938 SERPINB8P50452 374 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 CCR3P51677 355 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 JAM2P57087 298 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 MSLNQ13421 630 aaPredicted RBP22.51■■□□□ 1.19
SDF4-206ENST00000478938 MAPK6Q16659 721 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 USH1GQ495M9 461 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 LRRC6Q86X45 466 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 CCDC65Q8IXS2 484 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 SYT2Q8N9I0 419 aaPredicted RBP22.51■■□□□ 1.19
SDF4-206ENST00000478938 PRPF31Q8WWY3 499 aaKnown RBP22.51■■□□□ 1.19
SDF4-206ENST00000478938 TIMMDC1Q9NPL8 285 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 KAT6BQ8WYB5 2073 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 ATMINO43313 823 aaPredicted RBP22.51■■□□□ 1.19
SDF4-206ENST00000478938 RARBP10826 455 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 CA4P22748 312 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 ANXA13P27216 316 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 PIK3CAP42336 1068 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 ITGA8P53708 1063 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 AP2B1P63010 937 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 DCAF17Q5H9S7 520 aaPredicted RBP22.51■■□□□ 1.19
SDF4-206ENST00000478938 SEL1L2Q5TEA6 688 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 TRABDQ9H4I3 376 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 TUT1Q9H6E5 874 aaKnown RBP22.51■■□□□ 1.19
SDF4-206ENST00000478938 SIX2Q9NPC8 291 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 SH3GLB2Q9NR46 395 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 SEPT11Q9NVA2 429 aaKnown RBP22.51■■□□□ 1.19
SDF4-206ENST00000478938 FAIMQ9NVQ4 179 aa22.51■■□□□ 1.19
SDF4-206ENST00000478938 CHORDC1Q9UHD1 332 aaPredicted RBP22.51■■□□□ 1.19
SDF4-206ENST00000478938 C2orf71A6NGG8 1288 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 AQP4P55087 323 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 CACNB1Q02641 598 aaPredicted RBP22.5■■□□□ 1.19
SDF4-206ENST00000478938 ZBTB16Q05516 673 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 TRIM50Q86XT4 487 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 ZSWIM1Q9BR11 485 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 WHRNQ9P202 907 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 ZNF330Q9Y3S2 320 aaPredicted RBP22.5■■□□□ 1.19
SDF4-206ENST00000478938 POTEMA6NI47 508 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 RGL2O15211 777 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 TROVE2P10155 538 aaKnown RBP eCLIP22.5■■□□□ 1.19
SDF4-206ENST00000478938 DLATP10515 647 aaKnown RBP22.5■■□□□ 1.19
SDF4-206ENST00000478938 PIM1P11309 404 aaPredicted RBP22.5■■□□□ 1.19
SDF4-206ENST00000478938 COL6A2P12110 1019 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 COG7P83436 770 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 ZNF362Q5T0B9 420 aaPredicted RBP22.5■■□□□ 1.19
SDF4-206ENST00000478938 LPCAT4Q643R3 524 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 FOXR2Q6PJQ5 311 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 ZBED8Q8IZ13 594 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 METTL25Q8N6Q8 603 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 UBL4BQ8N7F7 174 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 ATP11CQ8NB49 1132 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 RIN3Q8TB24 985 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 ARMCX1Q9P291 453 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 ANKFY1Q9P2R3 1169 aa22.5■■□□□ 1.19
SDF4-206ENST00000478938 TXNDC9O14530 226 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 UQCRBP14927 111 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 RAP1GDS1P52306 607 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 PDK3Q15120 406 aa22.49■■□□□ 1.19
SDF4-206ENST00000478938 SIX1Q15475 284 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms