RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-209ENST00000478424 UROC1Q96N76 676 aa27.26■■□□□ 1.95
ARF1-209ENST00000478424 TMEM134Q9H6X4 195 aa27.26■■□□□ 1.95
ARF1-209ENST00000478424 DOCK6Q96HP0 2047 aa27.25■■□□□ 1.95
ARF1-209ENST00000478424 TRAPPC3O43617 180 aa27.25■■□□□ 1.95
ARF1-209ENST00000478424 XYLBO75191 536 aa27.25■■□□□ 1.95
ARF1-209ENST00000478424 CD2BP2O95400 341 aaKnown RBP27.25■■□□□ 1.95
ARF1-209ENST00000478424 MATR3P43243 847 aaKnown RBP eCLIP27.25■■□□□ 1.956e-6■■■■□ 21.9
ARF1-209ENST00000478424 CLCN5P51795 746 aa27.25■■□□□ 1.95
ARF1-209ENST00000478424 NUBP1P53384 320 aa27.25■■□□□ 1.95
ARF1-209ENST00000478424 CACNB1Q02641 598 aaPredicted RBP27.25■■□□□ 1.95
ARF1-209ENST00000478424 SOX4Q06945 474 aaPredicted RBP27.25■■□□□ 1.95
ARF1-209ENST00000478424 ACAP3Q96P50 834 aa27.25■■□□□ 1.95
ARF1-209ENST00000478424 RBM19Q9Y4C8 960 aaKnown RBP27.25■■□□□ 1.95
ARF1-209ENST00000478424 CDY1Q9Y6F8 540 aa27.25■■□□□ 1.95
ARF1-209ENST00000478424 TMEM189-UBE2V1I3L0A0 370 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 GFRA3O60609 400 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 HNRNPA1P09651 372 aaKnown RBP eCLIP27.24■■□□□ 1.95
ARF1-209ENST00000478424 LAMP2P13473 410 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 FGFR3P22607 806 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 UPP1Q16831 310 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 AXDND1Q5T1B0 1012 aaPredicted RBP27.24■■□□□ 1.95
ARF1-209ENST00000478424 MPZL3Q6UWV2 235 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 SLC44A3Q8N4M1 653 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 C3orf58Q8NDZ4 430 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 SNX27Q96L92 541 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 PNMA5Q96PV4 448 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 SLC38A7Q9NVC3 462 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 MTRRQ9UBK8 725 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 SMC3Q9UQE7 1217 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 NUMBLQ9Y6R0 609 aa27.24■■□□□ 1.95
ARF1-209ENST00000478424 PODXLO00592 558 aa27.23■■□□□ 1.95
ARF1-209ENST00000478424 MCF2P10911 925 aa27.23■■□□□ 1.95
ARF1-209ENST00000478424 SEZ6Q53EL9 994 aa27.23■■□□□ 1.95
ARF1-209ENST00000478424 DDX27Q96GQ7 796 aaKnown RBP27.23■■□□□ 1.95
ARF1-209ENST00000478424 ZBTB45Q96K62 511 aaPredicted RBP27.23■■□□□ 1.95
ARF1-209ENST00000478424 TIPINQ9BVW5 301 aa27.23■■□□□ 1.95
ARF1-209ENST00000478424 PTPRHQ9HD43 1115 aa27.23■■□□□ 1.95
ARF1-209ENST00000478424 NUB1Q9Y5A7 615 aa27.23■■□□□ 1.95
ARF1-209ENST00000478424 ZFHX2Q9C0A1 2572 aaPredicted RBP27.22■■□□□ 1.95
ARF1-209ENST00000478424 NPHP3-ACAD11A0A0J9YXS1 232 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 PI15O43692 258 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 SRFP11831 508 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 NPR3P17342 541 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 AOC1P19801 751 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 GUCY2CP25092 1073 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 SMTNP53814 917 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 ARPP19P56211 112 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 NOLC1Q14978 699 aaKnown RBP eCLIP27.22■■□□□ 1.95
ARF1-209ENST00000478424 ANKS3Q6ZW76 656 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 BICD1Q96G01 975 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 C17orf75Q9HAS0 396 aa27.22■■□□□ 1.95
ARF1-209ENST00000478424 MYH11P35749 1972 aa27.21■■□□□ 1.95
ARF1-209ENST00000478424 PLA2G4BP0C869 781 aa27.21■■□□□ 1.95
ARF1-209ENST00000478424 PLS3P13797 630 aa27.21■■□□□ 1.95
ARF1-209ENST00000478424 HTR4Q13639 388 aa27.21■■□□□ 1.95
ARF1-209ENST00000478424 RAB33AQ14088 237 aa27.21■■□□□ 1.95
ARF1-209ENST00000478424 DHX8Q14562 1220 aaKnown RBP27.21■■□□□ 1.95
ARF1-209ENST00000478424 RSPO2Q6UXX9 243 aaPredicted RBP27.21■■□□□ 1.95
ARF1-209ENST00000478424 RASSF8Q8NHQ8 419 aa27.21■■□□□ 1.95
ARF1-209ENST00000478424 NXPE3Q969Y0 559 aa27.21■■□□□ 1.95
ARF1-209ENST00000478424 C18orf25Q96B23 403 aaPredicted RBP27.21■■□□□ 1.95
ARF1-209ENST00000478424 ZMAT2Q96NC0 199 aaKnown RBP27.21■■□□□ 1.95
ARF1-209ENST00000478424 CITO14578 2027 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 PAPLNO95428 1278 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 CD300LGQ6UXG3 332 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 GPR152Q8TDT2 470 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 ING5Q8WYH8 240 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 RTP3Q9BQQ7 232 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 TBC1D17Q9HA65 648 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 HCFC1R1Q9NWW0 138 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 WNT16Q9UBV4 365 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 CDH7Q9ULB5 785 aa27.2■■□□□ 1.94
ARF1-209ENST00000478424 KRBA1A5PL33 1030 aa27.19■■□□□ 1.94
ARF1-209ENST00000478424 PROZP22891 400 aa27.19■■□□□ 1.94
ARF1-209ENST00000478424 HOXA9P31269 272 aa27.19■■□□□ 1.94
ARF1-209ENST00000478424 HYIQ5T013 277 aa27.19■■□□□ 1.94
ARF1-209ENST00000478424 SYT2Q8N9I0 419 aaPredicted RBP27.19■■□□□ 1.94
ARF1-209ENST00000478424 TMEM161BQ8NDZ6 487 aa27.19■■□□□ 1.94
ARF1-209ENST00000478424 SPIRE2Q8WWL2 714 aa27.19■■□□□ 1.94
ARF1-209ENST00000478424 DAXXQ9UER7 740 aaPredicted RBP27.19■■□□□ 1.94
ARF1-209ENST00000478424 ABLIM1O14639 778 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 TOM1L1O75674 476 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 MAPTP10636 758 aaKnown RBP27.18■■□□□ 1.94
ARF1-209ENST00000478424 MCM4P33991 863 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 SLC12A3P55017 1021 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 PABPC1LQ4VXU2 614 aaKnown RBP27.18■■□□□ 1.94
ARF1-209ENST00000478424 VARS2Q5ST30 1063 aaKnown RBP27.18■■□□□ 1.94
ARF1-209ENST00000478424 PARM1Q6UWI2 310 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 ALKAL1Q6UXT8 129 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 ITFG1Q8TB96 612 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 FGF13Q92913 245 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 CNTN3Q9P232 1028 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 BACE2Q9Y5Z0 518 aa27.18■■□□□ 1.94
ARF1-209ENST00000478424 ANHXE9PGG2 379 aa27.17■■□□□ 1.94
ARF1-209ENST00000478424 PRRG1O14668 218 aa27.17■■□□□ 1.94
ARF1-209ENST00000478424 KCNE1P15382 129 aa27.17■■□□□ 1.94
ARF1-209ENST00000478424 ELF1P32519 619 aa27.17■■□□□ 1.94
ARF1-209ENST00000478424 TMEM119Q4V9L6 283 aa27.17■■□□□ 1.94
ARF1-209ENST00000478424 XKR4Q5GH76 650 aa27.17■■□□□ 1.94
ARF1-209ENST00000478424 SPECC1Q5M775 1068 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms