RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 VCXQ9H320 206 aa15.05■□□□□ -0
NPHP4-208ENST00000478423 POLIQ9UNA4 740 aa15.05■□□□□ -0
NPHP4-208ENST00000478423 COPEO14579 308 aa15.05■□□□□ -0
NPHP4-208ENST00000478423 CELF2O95319 508 aaKnown RBP15.05■□□□□ -0
NPHP4-208ENST00000478423 SESN3P58005 492 aa15.05■□□□□ -0
NPHP4-208ENST00000478423 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
NPHP4-208ENST00000478423 GNASQ5JWF2 1037 aa15.05■□□□□ -0
NPHP4-208ENST00000478423 PMLP29590 882 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 ROR1Q01973 937 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 MMEL1Q495T6 779 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 PCNX4Q63HM2 1172 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 ATP6V1E2Q96A05 226 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 VPS39Q96JC1 886 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 PXMP2Q9NR77 195 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 FAM198AQ9UFP1 575 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 CLCN3P51790 818 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 CLNS1AP54105 237 aaKnown RBP15.04■□□□□ -0
NPHP4-208ENST00000478423 MAP3K21Q5TCX8 1036 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 CCNI2Q6ZMN8 369 aaPredicted RBP15.04■□□□□ -0
NPHP4-208ENST00000478423 MICAL1Q8TDZ2 1067 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 NUF2Q9BZD4 464 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 FAM49BQ9NUQ9 324 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 ZBTB24O43167 697 aaPredicted RBP15.04■□□□□ -0
NPHP4-208ENST00000478423 SUPT20HL2P0C7V6 817 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 TSTA3Q13630 321 aaPredicted RBP15.04■□□□□ -0
NPHP4-208ENST00000478423 GPAT2Q6NUI2 795 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 URGCPQ8TCY9 931 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 PRPF31Q8WWY3 499 aaKnown RBP15.04■□□□□ -0
NPHP4-208ENST00000478423 KIF9Q9HAQ2 790 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 MORC2Q9Y6X9 1032 aaPredicted RBP15.04■□□□□ -0
NPHP4-208ENST00000478423 GRAP2O75791 330 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 MMP14P50281 582 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 HNRNPH2P55795 449 aaKnown RBP15.04■□□□□ -0
NPHP4-208ENST00000478423 BIRC2Q13490 618 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 TRAPPC11Q7Z392 1133 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 ZBED2Q9BTP6 218 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 NT5C1AQ9BXI3 368 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 FIS1Q9Y3D6 152 aa15.04■□□□□ -0
NPHP4-208ENST00000478423 GTF2H1P32780 548 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 EIF3EP60228 445 aaKnown RBP15.03■□□□□ -0
NPHP4-208ENST00000478423 C4orf19Q8IY42 314 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 OSBPL8Q9BZF1 889 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 OLFML3Q9NRN5 406 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 OGTO15294 1046 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 TM4SF1P30408 202 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 KCNJ1P48048 391 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 KPNA2P52292 529 aaKnown RBP15.03■□□□□ -0
NPHP4-208ENST00000478423 PPP2R2AP63151 447 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 STILQ15468 1287 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 DGKDQ16760 1214 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 NT5DC1Q5TFE4 455 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 EPM2AIP1Q7L775 607 aaPredicted RBP15.03■□□□□ -0
NPHP4-208ENST00000478423 SAMD3Q8N6K7 520 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 APPL2Q8NEU8 664 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 RAET1EQ8TD07 263 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 ATP6V1G3Q96LB4 118 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 KATNAL1Q9BW62 490 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 BLOC1S4Q9NUP1 217 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 BFARQ9NZS9 450 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 G3BP2Q9UN86 482 aaKnown RBP15.03■□□□□ -0
NPHP4-208ENST00000478423 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.03■□□□□ -0
NPHP4-208ENST00000478423 FGFR4P22455 802 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 RARRES1P49788 294 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 TMPRSS15P98073 1019 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 AP1B1Q10567 949 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 MUM1Q2TAK8 710 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 HIBCHQ6NVY1 386 aaPredicted RBP15.03■□□□□ -0
NPHP4-208ENST00000478423 RAB44Q7Z6P3 723 aaPredicted RBP15.03■□□□□ -0
NPHP4-208ENST00000478423 CAPN6Q9Y6Q1 641 aa15.03■□□□□ -0
NPHP4-208ENST00000478423 GAS2O43903 313 aaKnown RBP15.02■□□□□ -0
NPHP4-208ENST00000478423 IL18RAPO95256 599 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 KLHL38Q2WGJ6 581 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 ATP11CQ8NB49 1132 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.02■□□□□ -09e-7■■■■■ 58.1
NPHP4-208ENST00000478423 FSD1LQ9BXM9 530 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 THAP2Q9H0W7 228 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 AGO4Q9HCK5 861 aaKnown RBP15.02■□□□□ -0
NPHP4-208ENST00000478423 EHD2Q9NZN4 543 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 GTF3C4Q9UKN8 822 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 PCDHAC2Q9Y5I4 1007 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 A0A087WUV0 522 aaPredicted RBP15.02■□□□□ -0
NPHP4-208ENST00000478423 CPB1P15086 417 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 NR1H3Q13133 447 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 RBBP5Q15291 538 aaKnown RBP15.02■□□□□ -0
NPHP4-208ENST00000478423 PID1Q7Z2X4 250 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 KCNK18Q7Z418 384 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 AFG1LQ8WV93 481 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 MAML1Q92585 1016 aa15.02■□□□□ -0
NPHP4-208ENST00000478423 RAD51CO43502 376 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 GUCY2CP25092 1073 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 CARSP49589 748 aaKnown RBP15.02□□□□□ -0.01
NPHP4-208ENST00000478423 COG7P83436 770 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 FKBP1CQ5VVH2 108 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 OTOP1Q7RTM1 612 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 FBXO16Q8IX29 292 aaPredicted RBP15.02□□□□□ -0.01
NPHP4-208ENST00000478423 RCOR2Q8IZ40 523 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.02□□□□□ -0.01
NPHP4-208ENST00000478423 IL17RAQ96F46 866 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 ARHGAP20Q9P2F6 1191 aa15.02□□□□□ -0.01
NPHP4-208ENST00000478423 MID2Q9UJV3 735 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms