RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 FRMD3A2A2Y4 597 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 HNRNPDLO14979 420 aaKnown RBP12.78□□□□□ -0.36
SKI-202ENST00000478223 CLDN3O15551 220 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 CUTAO60888 179 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 NR1I2O75469 434 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 SRGAP2BP0DMP2 458 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 KCNE1P15382 129 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 SP100P23497 879 aaPredicted RBP12.78□□□□□ -0.36
SKI-202ENST00000478223 KLRC2P26717 231 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 MATR3P43243 847 aaKnown RBP eCLIP12.78□□□□□ -0.367e-7■■■■■ 29.2
SKI-202ENST00000478223 BRCC3P46736 316 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 LIG4P49917 911 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 YARSP54577 528 aaKnown RBP12.78□□□□□ -0.36
SKI-202ENST00000478223 BMS1Q14692 1282 aaKnown RBP12.78□□□□□ -0.36
SKI-202ENST00000478223 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 FAM171A1Q5VUB5 890 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 ZNF720Q7Z2F6 126 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
SKI-202ENST00000478223 MAP4K3Q8IVH8 894 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 ZSWIM2Q8NEG5 633 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 RIN2Q8WYP3 895 aaPredicted RBP12.78□□□□□ -0.36
SKI-202ENST00000478223 HPS3Q969F9 1004 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 DHX58Q96C10 678 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 EMILIN2Q9BXX0 1053 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 POMKQ9H5K3 350 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 TUBGCP4Q9UGJ1 667 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 KCNG1Q9UIX4 513 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 FAM50BQ9Y247 325 aa12.78□□□□□ -0.36
SKI-202ENST00000478223 SF3B1O75533 1304 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■■■ 123.8
SKI-202ENST00000478223 H0YCG3 227 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 ADAM12O43184 909 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 SPATA31D3P0C874 917 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 CASP1P29466 404 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 GUCY2FP51841 1108 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 CBX2Q14781 532 aaPredicted RBP12.77□□□□□ -0.37
SKI-202ENST00000478223 ENOX2Q16206 610 aaKnown RBP12.77□□□□□ -0.37
SKI-202ENST00000478223 SPATA31D4Q6ZUB0 917 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 PALB2Q86YC2 1186 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 TMEM87AQ8NBN3 555 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 GLIS3Q8NEA6 775 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 FBXL18Q96ME1 805 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 ST6GALNAC4Q9H4F1 302 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 C11orf16Q9NQ32 467 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 MAN1C1Q9NR34 630 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 TOPORSQ9NS56 1045 aaPredicted RBP12.77□□□□□ -0.37
SKI-202ENST00000478223 STK39Q9UEW8 545 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 PTPRDP23468 1912 aa12.77□□□□□ -0.37
SKI-202ENST00000478223 GREB1Q4ZG55 1949 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 ZNF638Q14966 1978 aaKnown RBP12.76□□□□□ -0.37
SKI-202ENST00000478223 A0A0B4J269 797 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 TTC26A0AVF1 554 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 LACTBL1A8MY62 500 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 LOC730098B7Z3J9 87 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 TMEM189-UBE2V1I3L0A0 370 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 PODXLO00592 558 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 B3GAT3O94766 335 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 IDEP14735 1019 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 HOXB8P17481 243 aaPredicted RBP12.76□□□□□ -0.37
SKI-202ENST00000478223 TKTP29401 623 aaKnown RBP12.76□□□□□ -0.37
SKI-202ENST00000478223 ME1P48163 572 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 RESP18Q5W5W9 173 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 KIAA1841Q6NSI8 718 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 RSPO2Q6UXX9 243 aaPredicted RBP12.76□□□□□ -0.37
SKI-202ENST00000478223 TMC5Q6UXY8 1006 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 CEP57Q86XR8 500 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 LNX1Q8TBB1 728 aaPredicted RBP12.76□□□□□ -0.37
SKI-202ENST00000478223 KCNG4Q8TDN1 519 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 RPGRIP1Q96KN7 1286 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 MSTO1Q9BUK6 570 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 PHF7Q9BWX1 381 aaPredicted RBP12.76□□□□□ -0.37
SKI-202ENST00000478223 ADAM7Q9H2U9 754 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 MRPL44Q9H9J2 332 aaKnown RBP12.76□□□□□ -0.37
SKI-202ENST00000478223 PANK4Q9NVE7 773 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 DZANK1Q9NVP4 752 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 KBTBD4Q9NVX7 518 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 RCOR1Q9UKL0 485 aa12.76□□□□□ -0.37
SKI-202ENST00000478223 FAM86C2PA6NEL3 165 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 PI4K2BG5E9Z4 385 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 PPEF2O14830 753 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 OGTO15294 1046 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 POLR2DO15514 142 aaKnown RBP12.75□□□□□ -0.37
SKI-202ENST00000478223 TGM5O43548 720 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 RFPL2O75678 378 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 GCNT3O95395 438 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 GLUD1P00367 558 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 ADH1AP07327 375 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 CLTAP09496 248 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
SKI-202ENST00000478223 GAP43P17677 238 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 FGFR3P22607 806 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 ADSSP30520 456 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 ACOT2P49753 483 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 WNT7BP56706 349 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 PSMD5Q16401 504 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 TPRNQ4KMQ1 711 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 CRELD2Q6UXH1 353 aaPredicted RBP12.75□□□□□ -0.37
SKI-202ENST00000478223 PPFIBP1Q86W92 1011 aa12.75□□□□□ -0.37
SKI-202ENST00000478223 RNF135Q8IUD6 432 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms