RNA–Protein interactions for RNA: ENST00000478172.1

TCAF1-204, Transcript of TRPM8 channel associated factor 1, human

TSL 4

Gene TCAF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCAF1-204	ENST00000478172	CEBPB	P17676	345 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	FGFR3	P22607	806 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	TKT	P29401	623 aa	Known RBP	11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	CLCNKB	P51801	687 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	NAB2	Q15742	525 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	FAM187B	Q17R55	369 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	SLC5A9	Q2M3M2	681 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	UVSSA	Q2YD98	709 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	EEF1DP3	Q658K8	133 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	ZNF852	Q6ZMS4	543 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	GPR161	Q8N6U8	529 aa	Known RBP	11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	BSND	Q8WZ55	320 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	TNFRSF25	Q93038	417 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	CNTNAP3B	Q96NU0	1288 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	CNTNAP3	Q9BZ76	1288 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	PLA2G2F	Q9BZM2	168 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	GOLGA2P5	Q9HBQ8	144 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	MTRR	Q9UBK8	725 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	CDV3	Q9UKY7	258 aa	Known RBP	11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	NDRG2	Q9UN36	371 aa	Known RBP	11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	MRPS17	Q9Y2R5	130 aa	Known RBP	11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	CACNA1B	Q00975	2339 aa		11.65	□□□□□ -0.54
TCAF1-204	ENST00000478172	SPTBN2	O15020	2390 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	RALGAPA1	Q6GYQ0	2036 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	ARHGEF35	A5YM69	484 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	PRRG1	O14668	218 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	EPB41L2	O43491	1005 aa	Known RBP	11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	MED24	O75448	989 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	ECI2	O75521	394 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	EDN1	P05305	212 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	POU2F2	P09086	479 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	XRCC6	P12956	609 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	SDHB	P21912	280 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	IGFBP6	P24592	240 aa	Predicted RBP	11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	ELF1	P32519	619 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	ARPP19	P56211	112 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	GRM2	Q14416	872 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	DCAF4L1	Q3SXM0	396 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	ANKS3	Q6ZW76	656 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	ZBTB44	Q8NCP5	570 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	DDX27	Q96GQ7	796 aa	Known RBP	11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	BORCS6	Q96GS4	357 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	NELL2	Q99435	816 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	KIFC3	Q9BVG8	833 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	EPC1	Q9H2F5	836 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	TUFT1	Q9NNX1	390 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	GDE1	Q9NZC3	331 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	GMEB2	Q9UKD1	530 aa		11.64	□□□□□ -0.55
TCAF1-204	ENST00000478172	COL4A2	P08572	1712 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	BTBD18	B2RXH4	712 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	TMEM189-UBE2V1	I3L0A0	370 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	ACKR2	O00590	384 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	TRAPPC3	O43617	180 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	SPATA31C1	P0DKV0	1188 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	PTPN2	P17706	415 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	MCM7	P33993	719 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	NAMPT	P43490	491 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	BRCC3	P46736	316 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	RPS9	P46781	194 aa	Known RBP	11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	ATXN1	P54253	815 aa	Known RBP	11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	ROR1	Q01973	937 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	LMNB2	Q03252	620 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	ADCY1	Q08828	1119 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	MTAP	Q13126	283 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	TRIM29	Q14134	588 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	PPP2R5A	Q15172	486 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	LPAL2	Q16609	132 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	TANGO2	Q6ICL3	276 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	PADI6	Q6TGC4	694 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	CATSPER3	Q86XQ3	398 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	DIS3L2	Q8IYB7	885 aa	Known RBP	11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	NECAB1	Q8N987	351 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	CLDN23	Q96B33	292 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	ELSPBP1	Q96BH3	223 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	UROC1	Q96N76	676 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	MTMR9	Q96QG7	549 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	NACC1	Q96RE7	527 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	CORO1B	Q9BR76	489 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	CCDC113	Q9H0I3	377 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	TMEM60	Q9H2L4	133 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	BRD9	Q9H8M2	597 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	POLD4	Q9HCU8	107 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	PRMT8	Q9NR22	394 aa	Predicted RBP	11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	RAB23	Q9ULC3	237 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	BACE2	Q9Y5Z0	518 aa		11.63	□□□□□ -0.55
TCAF1-204	ENST00000478172	DCDC2B	A2VCK2	349 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	PRR5-ARHGAP8	B1AHC4	643 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	LILRB5	O75023	590 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	FDPS	P14324	419 aa	Known RBP	11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	RBM25	P49756	843 aa	Known RBP	11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	OSTN	P61366	133 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	ARHGAP8	P85298	464 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	UPP1	Q16831	310 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	ATF7IP2	Q5U623	682 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	PDZD4	Q76G19	769 aa	Predicted RBP	11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	RTL10	Q7L3V2	364 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	C3orf58	Q8NDZ4	430 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	ERMN	Q8TAM6	284 aa		11.62	□□□□□ -0.55
TCAF1-204	ENST00000478172	DNASE1L2	Q92874	299 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms