RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 DUSP12Q9UNI6 340 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 COG5Q9UP83 839 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 SRPK3Q9UPE1 567 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 COQ6Q9Y2Z9 468 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 TNPO3Q9Y5L0 923 aaKnown RBP3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 PMF1-BGLAPU3KQ54 211 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 KIF13AQ9H1H9 1805 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 FHAD1B1AJZ9 1412 aa3.92□□□□□ -1.78
FNDC3B-209ENST00000478016 GOLGA6L10A0A0M3HER8 536 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 LINC00854A0A1B0GVQ3 168 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 TCRBV5S4A2TA0A5A2 114 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 PI4K2BG5E9Z4 385 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 H0YHG0 523 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 ZNF561-AS1K7EIQ3 104 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 KIF2AO00139 706 aaPredicted RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 P4HA2O15460 535 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 TLR5O60602 858 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 DDX58O95786 925 aaKnown RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 AMY2AP04746 511 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 MTHFD1P11586 935 aaKnown RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 ATP6V1B1P15313 513 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 ZNF24P17028 368 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 AMY2BP19961 511 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 MUTP22033 750 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 XPAP23025 273 aaPredicted RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 HSPA1LP34931 641 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 SOX5P35711 763 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 ECE1P42892 770 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 MTHFRP42898 656 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 GUCY2FP51841 1108 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 TMF1P82094 1093 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 LACTBP83111 547 aaPredicted RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 NFKB2Q00653 900 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 DEUP1Q05D60 604 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 SP140Q13342 867 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 CLUL1Q15846 466 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 CR1LQ2VPA4 569 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 C5orf22Q49AR2 442 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 SETMARQ53H47 684 aaPredicted RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 BOLA3Q53S33 107 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 CAVIN4Q5BKX8 364 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 FIGNQ5HY92 759 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 METTL24Q5JXM2 366 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 VPS53Q5VIR6 699 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 AP1ARQ63HQ0 302 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 FAM180BQ6P0A1 224 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 ABHD17CQ6PCB6 329 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 TEPPQ6URK8 271 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 CRTC1Q6UUV9 634 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 BTNL9Q6UXG8 535 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 LDHAL6AQ6ZMR3 332 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 NEK10Q6ZWH5 1172 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 RNF180Q86T96 592 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 PTRH1Q86Y79 214 aaKnown RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 PASD1Q8IV76 773 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 CARNMT1Q8N4J0 409 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 CISD2Q8N5K1 135 aaKnown RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 IGSF22Q8N9C0 903 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 TRIML1Q8N9V2 468 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 ZSCAN18Q8TBC5 510 aaPredicted RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 SH3RF2Q8TEC5 729 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 TEKT4Q8WW24 435 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 CLEC4DQ8WXI8 215 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 RABGGTAQ92696 567 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 DACT3Q96B18 629 aaPredicted RBP3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 HOOK2Q96ED9 719 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 MFSD3Q96ES6 412 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 C7orf25Q9BPX7 421 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 KCTD10Q9H3F6 313 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 HELLSQ9NRZ9 838 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 TCP11L1Q9NUJ3 509 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 ETAA1Q9NY74 926 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 HSPBP1Q9NZL4 362 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 TBC1D7Q9P0N9 293 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 FBXL5Q9UKA1 691 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 PHTF1Q9UMS5 762 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 ATP23Q9Y6H3 246 aa3.91□□□□□ -1.78
FNDC3B-209ENST00000478016 CUL7Q14999 1698 aa3.9□□□□□ -1.78
FNDC3B-209ENST00000478016 PHLDB1Q86UU1 1377 aa3.9□□□□□ -1.78
FNDC3B-209ENST00000478016 DIP2BQ9P265 1576 aa3.9□□□□□ -1.78
FNDC3B-209ENST00000478016 FSD2A1L4K1 749 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 LACTBL1A8MY62 500 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 RTCAO00442 366 aaKnown RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 MAN2B1O00754 1011 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 APAF1O14727 1248 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 FRS3O43559 492 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 KLHL41O60662 606 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 B3GALNT1O75752 331 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 EYA4O95677 639 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 LRG1P02750 347 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 LTFP02788 710 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 PARP1P09874 1014 aaKnown RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 KRT10P13645 584 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 FAHP16930 419 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SDSP20132 328 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 CFPP27918 469 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 GJA4P35212 333 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 SKIV2L2P42285 1042 aaKnown RBP3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 PEX5P50542 639 aa3.9□□□□□ -1.79
FNDC3B-209ENST00000478016 PDE6CP51160 858 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms