RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 BTBD6Q96KE9 485 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 KIAA1586Q9HCI6 787 aa19.32■□□□□ 0.68
CCM2-209ENST00000477605 CHORDC1Q9UHD1 332 aaPredicted RBP19.32■□□□□ 0.68
CCM2-209ENST00000477605 H0YCG3 227 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 CLDN3O15551 220 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 UNGP13051 313 aaPredicted RBP19.31■□□□□ 0.68
CCM2-209ENST00000477605 KCNJ1P48048 391 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 BRDTQ58F21 947 aaPredicted RBP19.31■□□□□ 0.68
CCM2-209ENST00000477605 CYB5D1Q6P9G0 228 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 SV2AQ7L0J3 742 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 PARP9Q8IXQ6 854 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 MCOLN2Q8IZK6 566 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 GPD1LQ8N335 351 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 TTLL6Q8N841 843 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 SAAL1Q96ER3 474 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 GLIS2Q9BZE0 524 aaPredicted RBP19.31■□□□□ 0.68
CCM2-209ENST00000477605 CDC42EP4Q9H3Q1 356 aaKnown RBP19.31■□□□□ 0.68
CCM2-209ENST00000477605 PGAP2Q9UHJ9 254 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 SMIM23A6NLE4 172 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 MAFGO15525 162 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 FDX1P10109 184 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 SCP2P22307 547 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 PPP1R2P3Q6NXS1 205 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 CEP128Q6ZU80 1094 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 ATL2Q8NHH9 583 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 TAAR1Q96RJ0 339 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 PRMT1Q99873 361 aaKnown RBP19.31■□□□□ 0.68
CCM2-209ENST00000477605 ZNF341Q9BYN7 854 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 TMEM39BQ9GZU3 492 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 KIAA1683Q9H0B3 1180 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 ACP6Q9NPH0 428 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 ANAPC7Q9UJX3 599 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 PCDHB2Q9Y5E7 798 aa19.31■□□□□ 0.68
CCM2-209ENST00000477605 SORBS3O60504 671 aa19.3■□□□□ 0.68
CCM2-209ENST00000477605 RDXP35241 583 aaKnown RBP19.3■□□□□ 0.68
CCM2-209ENST00000477605 SNCBQ16143 134 aa19.3■□□□□ 0.68
CCM2-209ENST00000477605 EXOC3L1Q86VI1 746 aa19.3■□□□□ 0.68
CCM2-209ENST00000477605 MOV10L1Q9BXT6 1211 aaKnown RBP19.3■□□□□ 0.68
CCM2-209ENST00000477605 VEZTQ9HBM0 779 aa19.3■□□□□ 0.68
CCM2-209ENST00000477605 AAASQ9NRG9 546 aa19.3■□□□□ 0.68
CCM2-209ENST00000477605 ASIC3Q9UHC3 531 aa19.3■□□□□ 0.68
CCM2-209ENST00000477605 FAM170AA1A519 330 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 TP73O15350 636 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 TTC4O95801 387 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 CCNE2O96020 404 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 DLATP10515 647 aaKnown RBP19.29■□□□□ 0.68
CCM2-209ENST00000477605 IVDP26440 423 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 C15orf39Q6ZRI6 1047 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 RELL1Q8IUW5 271 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 RTKN2Q8IZC4 609 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 POMGNT1Q8WZA1 660 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 JPH2Q9BR39 696 aaPredicted RBP19.29■□□□□ 0.68
CCM2-209ENST00000477605 PLCD4Q9BRC7 762 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 PDCD2LQ9BRP1 358 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 TRAIPQ9BWF2 469 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 FOXP3Q9BZS1 431 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 DCLK3Q9C098 648 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 SLC12A4Q9UP95 1085 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 PCDHA10Q9Y5I2 948 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 VIMP08670 466 aaKnown RBP19.29■□□□□ 0.68
CCM2-209ENST00000477605 EIF2AK2P19525 551 aaKnown RBP19.29■□□□□ 0.68
CCM2-209ENST00000477605 RPS6P62753 249 aaKnown RBP19.29■□□□□ 0.68
CCM2-209ENST00000477605 CLDN10P78369 228 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 PPARDQ03181 441 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 SPRED3Q2MJR0 410 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 SLC39A4Q6P5W5 647 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 NSMFQ6X4W1 530 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 TRIM72Q6ZMU5 477 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 ANO5Q75V66 913 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 CCDC25Q86WR0 208 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 CPNE8Q86YQ8 564 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 MCPH1Q8NEM0 835 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 C1orf54Q8WWF1 131 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 POP1Q99575 1024 aaKnown RBP19.29■□□□□ 0.68
CCM2-209ENST00000477605 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 PXMP2Q9NR77 195 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 C1orf112Q9NSG2 853 aa19.29■□□□□ 0.68
CCM2-209ENST00000477605 CFAP73A6NFT4 308 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 KRT5P13647 590 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 SLCO1A2P46721 670 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 GSCP56915 257 aaPredicted RBP19.28■□□□□ 0.68
CCM2-209ENST00000477605 PLA2G4FQ68DD2 849 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 AGBL3Q8NEM8 1001 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 KCNN1Q92952 543 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 ARHGEF2Q92974 986 aaKnown RBP19.28■□□□□ 0.68
CCM2-209ENST00000477605 ATP6V0A1Q93050 837 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 GPRASP2Q96D09 838 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 VCPIP1Q96JH7 1222 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 RAVER2Q9HCJ3 691 aaKnown RBP19.28■□□□□ 0.68
CCM2-209ENST00000477605 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.28■□□□□ 0.68
CCM2-209ENST00000477605 PSME4Q14997 1843 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 TMEM150BA6NC51 233 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 PSTPIP1O43586 416 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 MGRN1O60291 552 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 ATP9AO75110 1047 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 CYP1A1P04798 512 aaPredicted RBP19.28■□□□□ 0.68
CCM2-209ENST00000477605 ATF2P15336 505 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 CCNG2Q16589 344 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 LIN9Q5TKA1 542 aa19.28■□□□□ 0.68
CCM2-209ENST00000477605 TRPM8Q7Z2W7 1104 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms