RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 HNRNPDLO14979 420 aaKnown RBP19.28■□□□□ 0.68
PTPN7-209ENST00000477554 TEX28O15482 410 aa19.28■□□□□ 0.68
PTPN7-209ENST00000477554 PRPF40AO75400 957 aaKnown RBP19.28■□□□□ 0.68
PTPN7-209ENST00000477554 SPATA31D3P0C874 917 aa19.28■□□□□ 0.68
PTPN7-209ENST00000477554 IDEP14735 1019 aa19.28■□□□□ 0.68
PTPN7-209ENST00000477554 BRCC3P46736 316 aa19.28■□□□□ 0.68
PTPN7-209ENST00000477554 SPATA31D4Q6ZUB0 917 aa19.28■□□□□ 0.68
PTPN7-209ENST00000477554 MAP4K3Q8IVH8 894 aa19.28■□□□□ 0.68
PTPN7-209ENST00000477554 KCNN1Q92952 543 aa19.28■□□□□ 0.68
PTPN7-209ENST00000477554 ACAP3Q96P50 834 aa19.28■□□□□ 0.68
PTPN7-209ENST00000477554 CCDC94Q9BW85 323 aaPredicted RBP19.28■□□□□ 0.68
PTPN7-209ENST00000477554 POLR2DO15514 142 aaKnown RBP19.27■□□□□ 0.68
PTPN7-209ENST00000477554 CLDN3O15551 220 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 ADAM12O43184 909 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 TADA2AO75478 443 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 PIGRP01833 764 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 SP100P23497 879 aaPredicted RBP19.27■□□□□ 0.68
PTPN7-209ENST00000477554 ADSSP30520 456 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 MATR3P43243 847 aaKnown RBP eCLIP19.27■□□□□ 0.68
PTPN7-209ENST00000477554 GLUD2P49448 558 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 LIG4P49917 911 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 CLCN4P51793 760 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 DSG1Q02413 1049 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 UPP1Q16831 310 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 RESP18Q5W5W9 173 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 SUSD6Q92537 303 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 FAM84AQ96KN4 292 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 MRPL17Q9NRX2 175 aaKnown RBP19.27■□□□□ 0.68
PTPN7-209ENST00000477554 KBTBD4Q9NVX7 518 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 CNTN3Q9P232 1028 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 C2orf16Q68DN1 1984 aa19.27■□□□□ 0.68
PTPN7-209ENST00000477554 A0A0B4J269 797 aa19.26■□□□□ 0.67
PTPN7-209ENST00000477554 WNT7BP56706 349 aa19.26■□□□□ 0.67
PTPN7-209ENST00000477554 ENOX2Q16206 610 aaKnown RBP19.26■□□□□ 0.67
PTPN7-209ENST00000477554 FAM171A1Q5VUB5 890 aa19.26■□□□□ 0.67
PTPN7-209ENST00000477554 SCARA3Q6AZY7 606 aa19.26■□□□□ 0.67
PTPN7-209ENST00000477554 ADALQ6DHV7 355 aa19.26■□□□□ 0.67
PTPN7-209ENST00000477554 RIN2Q8WYP3 895 aaPredicted RBP19.26■□□□□ 0.67
PTPN7-209ENST00000477554 BLZF1Q9H2G9 400 aa19.26■□□□□ 0.67
PTPN7-209ENST00000477554 EPHX3Q9H6B9 360 aa19.26■□□□□ 0.67
PTPN7-209ENST00000477554 MRPL44Q9H9J2 332 aaKnown RBP19.26■□□□□ 0.67
PTPN7-209ENST00000477554 LACTBL1A8MY62 500 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 URODP06132 367 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 KCNE1P15382 129 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 KLRC2P26717 231 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 ACOT2P49753 483 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 YARSP54577 528 aaKnown RBP19.25■□□□□ 0.67
PTPN7-209ENST00000477554 UBE2HP62256 183 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 HERC4Q5GLZ8 1057 aaPredicted RBP19.25■□□□□ 0.67
PTPN7-209ENST00000477554 RARS2Q5T160 578 aaKnown RBP19.25■□□□□ 0.67
PTPN7-209ENST00000477554 RSPO2Q6UXX9 243 aaPredicted RBP19.25■□□□□ 0.67
PTPN7-209ENST00000477554 CEP57Q86XR8 500 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 GJD3Q8N144 294 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 TRIM9Q9C026 710 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 ST6GALNAC4Q9H4F1 302 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 LMBRD1Q9NUN5 540 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 PANK4Q9NVE7 773 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 TTC26A0AVF1 554 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 C19orf67A6NJJ6 358 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 PPEF2O14830 753 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 NR1I2O75469 434 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 B3GAT3O94766 335 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 PRPF6O94906 941 aaKnown RBP19.25■□□□□ 0.67
PTPN7-209ENST00000477554 HOXD13P35453 343 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 PALB2Q86YC2 1186 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 ADHFE1Q8IWW8 467 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 MSTO1Q9BUK6 570 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 RXFP1Q9HBX9 757 aa19.25■□□□□ 0.67
PTPN7-209ENST00000477554 A0A1B0GVL5 298 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 H0YCG3 227 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 PODXLO00592 558 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 GCNT3O95395 438 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 TKTP29401 623 aaKnown RBP19.24■□□□□ 0.67
PTPN7-209ENST00000477554 SSTR3P32745 418 aaPredicted RBP19.24■□□□□ 0.67
PTPN7-209ENST00000477554 AFMP43652 599 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 NFKBIBQ15653 356 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 USP41Q3LFD5 358 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 PUS10Q3MIT2 529 aaKnown RBP19.24■□□□□ 0.67
PTPN7-209ENST00000477554 CRELD2Q6UXH1 353 aaPredicted RBP19.24■□□□□ 0.67
PTPN7-209ENST00000477554 TMC5Q6UXY8 1006 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 LNX1Q8TBB1 728 aaPredicted RBP19.24■□□□□ 0.67
PTPN7-209ENST00000477554 CASP10Q92851 521 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 CLSTN3Q9BQT9 956 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 TOPORSQ9NS56 1045 aaPredicted RBP19.24■□□□□ 0.67
PTPN7-209ENST00000477554 SERTAD1Q9UHV2 236 aa19.24■□□□□ 0.67
PTPN7-209ENST00000477554 CPSF3Q9UKF6 684 aaKnown RBP19.24■□□□□ 0.67
PTPN7-209ENST00000477554 SF3B1O75533 1304 aaKnown RBP eCLIP19.23■□□□□ 0.67
PTPN7-209ENST00000477554 A0A1W2PQ27 194 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 A0A1W2PQ64 194 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 A0A1W2PQD8 194 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 OGTO15294 1046 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 RFPL2O75678 378 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 CUL4BQ13620 913 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 KIAA1841Q6NSI8 718 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 APBB1IPQ7Z5R6 666 aaPredicted RBP19.23■□□□□ 0.67
PTPN7-209ENST00000477554 FAM212AQ96EL1 285 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 FBXL18Q96ME1 805 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 EMILIN2Q9BXX0 1053 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 TNMDQ9H2S6 317 aa19.23■□□□□ 0.67
PTPN7-209ENST00000477554 POMKQ9H5K3 350 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms