RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 EGR2P11161 476 aaPredicted RBP5.61□□□□□ -1.51
UBR3-209ENST00000477461 GSPT1P15170 499 aaKnown RBP5.61□□□□□ -1.51
UBR3-209ENST00000477461 ALOX15P16050 662 aaPredicted RBP5.61□□□□□ -1.51
UBR3-209ENST00000477461 SLC6A2P23975 617 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 MXRA7P84157 204 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 ADRM1Q16186 407 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 SPDYE7PQ495Y7 208 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 ABHD17BQ5VST6 288 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 SPATA31A6Q5VVP1 1343 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 FBXO42Q6P3S6 717 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 GPR149Q86SP6 731 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 RHOT2Q8IXI1 618 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 LMBR1Q8WVP7 490 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 RNF31Q96EP0 1072 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 ZNF764Q96H86 408 aaPredicted RBP5.61□□□□□ -1.51
UBR3-209ENST00000477461 PAWRQ96IZ0 340 aaKnown RBP5.61□□□□□ -1.51
UBR3-209ENST00000477461 Q96MF0 132 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 MYOCQ99972 504 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 ACE2Q9BYF1 805 aaPredicted RBP5.61□□□□□ -1.51
UBR3-209ENST00000477461 SENP6Q9GZR1 1112 aaPredicted RBP5.61□□□□□ -1.51
UBR3-209ENST00000477461 R3HDMLQ9H3Y0 253 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 BCO1Q9HAY6 547 aa5.61□□□□□ -1.51
UBR3-209ENST00000477461 POLA1P09884 1462 aaPredicted RBP5.6□□□□□ -1.51
UBR3-209ENST00000477461 PJA2O43164 708 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 FOSP01100 380 aaPredicted RBP5.6□□□□□ -1.51
UBR3-209ENST00000477461 ZNF37AP17032 561 aaPredicted RBP5.6□□□□□ -1.51
UBR3-209ENST00000477461 LMO1P25800 156 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 SREBF1P36956 1147 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 MPLP40238 635 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 TMPRSS15P98073 1019 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 SRSF2Q01130 221 aaKnown RBP5.6□□□□□ -1.51
UBR3-209ENST00000477461 MUM1Q2TAK8 710 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 MUM1L1Q5H9M0 696 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 B3GNTL1Q67FW5 361 aaPredicted RBP5.6□□□□□ -1.51
UBR3-209ENST00000477461 RD3Q7Z3Z2 195 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 COQ10AQ96MF6 247 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 SLKQ9H2G2 1235 aaPredicted RBP5.6□□□□□ -1.51
UBR3-209ENST00000477461 NOX1Q9Y5S8 564 aa5.6□□□□□ -1.51
UBR3-209ENST00000477461 CUX2O14529 1486 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 SOGA1O94964 1423 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 A0A1B0GTW7 788 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 MARCH11A6NNE9 402 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 ESRRBO95718 433 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 POMCP01189 267 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 ATP5JP18859 108 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 FPR1P21462 350 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 ALDH1A3P47895 512 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 C21orf58P58505 322 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 MRPS9P82933 396 aaKnown RBP5.59□□□□□ -1.51
UBR3-209ENST00000477461 PPP3CAQ08209 521 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 UBXN2BQ14CS0 331 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 ERCC6LQ2NKX8 1250 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 PRR16Q569H4 304 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 ZNF529Q6P280 563 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 FAM180AQ6UWF9 173 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 LHFPL2Q6ZUX7 228 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 UBE3BQ7Z3V4 1068 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 PRIMA1Q86XR5 153 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 SIMC1Q8NDZ2 872 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 GREM2Q9H772 168 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 RBM12Q9NTZ6 932 aaKnown RBP5.59□□□□□ -1.51
UBR3-209ENST00000477461 C14orf119Q9NWQ9 140 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 ZBTB21Q9ULJ3 1066 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 APOBEC2Q9Y235 224 aaKnown RBP5.59□□□□□ -1.51
UBR3-209ENST00000477461 PRKAB1Q9Y478 270 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 PCDHGA2Q9Y5H1 932 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 ACTL7AQ9Y615 435 aa5.59□□□□□ -1.51
UBR3-209ENST00000477461 IFT140Q96RY7 1462 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 OSMP13725 252 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 TYRP1P17643 537 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 HSD11B2P80365 405 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 OCA2Q04671 838 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 SCAPQ12770 1279 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 MPP3Q13368 585 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 STAT4Q14765 748 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 CT47A1Q5JQC4 288 aaPredicted RBP5.58□□□□□ -1.52
UBR3-209ENST00000477461 KCNK18Q7Z418 384 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 CCHCR1Q8TD31 782 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 FUBP3Q96I24 572 aaKnown RBP eCLIP5.58□□□□□ -1.52
UBR3-209ENST00000477461 SLC2A13Q96QE2 648 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 ADI1Q9BV57 179 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 REXO4Q9GZR2 422 aaKnown RBP5.58□□□□□ -1.52
UBR3-209ENST00000477461 CAAP1Q9H8G2 361 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 ADARB2Q9NS39 739 aaKnown RBP5.58□□□□□ -1.52
UBR3-209ENST00000477461 FBXO34Q9NWN3 711 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 DNAJC28Q9NX36 388 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 USP25Q9UHP3 1055 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 SCOCQ9UIL1 159 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 AJAP1Q9UKB5 411 aaPredicted RBP5.58□□□□□ -1.52
UBR3-209ENST00000477461 RUVBL1Q9Y265 456 aaKnown RBP5.58□□□□□ -1.52
UBR3-209ENST00000477461 SIK3Q9Y2K2 1263 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 INSL6Q9Y581 213 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 RAD54L2Q9Y4B4 1467 aa5.58□□□□□ -1.52
UBR3-209ENST00000477461 IL2RBP14784 551 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 FGFR4P22455 802 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 SP140Q13342 867 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 SEPT2Q15019 361 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 CHAC2Q8WUX2 184 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 NACC2Q96BF6 587 aa5.57□□□□□ -1.52
UBR3-209ENST00000477461 KIAA1586Q9HCI6 787 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms