RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 TSG101Q99816 390 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 RSAD1Q9HA92 442 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 UBN1Q9NPG3 1134 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 CPSF3Q9UKF6 684 aaKnown RBP18.3■□□□□ 0.52
EPHB4-204ENST00000477446 GIT1Q9Y2X7 761 aa18.3■□□□□ 0.52
EPHB4-204ENST00000477446 MEFVO15553 781 aaPredicted RBP18.29■□□□□ 0.52
EPHB4-204ENST00000477446 TEX33O43247 280 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 EXTL3O43909 919 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 LRRC63Q05C16 580 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 NFIL3Q16649 462 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 PRPF38BQ5VTL8 546 aaKnown RBP18.29■□□□□ 0.52
EPHB4-204ENST00000477446 TTI2Q6NXR4 508 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 XXYLT1Q8NBI6 393 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 KIF18AQ8NI77 898 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 HELQQ8TDG4 1101 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 PPP1R13BQ96KQ4 1090 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 ZBED2Q9BTP6 218 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 CXCL16Q9H2A7 254 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 TRMT1Q9NXH9 659 aaKnown RBP18.29■□□□□ 0.52
EPHB4-204ENST00000477446 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
EPHB4-204ENST00000477446 COL4A6Q14031 1691 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 GBF1Q92538 1859 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 A0A1W2PQC6 194 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 ARL5CA6NH57 179 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 GRXCR1A8MXD5 290 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 HOXA2O43364 376 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 CXCL8P10145 99 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 NR2F2P24468 414 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 MLH1P40692 756 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 AFF1P51825 1210 aaKnown RBP18.28■□□□□ 0.52
EPHB4-204ENST00000477446 YARSP54577 528 aaKnown RBP18.28■□□□□ 0.52
EPHB4-204ENST00000477446 ADAM9Q13443 819 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 MYBPC2Q14324 1141 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 ENOX2Q16206 610 aaKnown RBP18.28■□□□□ 0.52
EPHB4-204ENST00000477446 SLC10A6Q3KNW5 377 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 TMEM139Q8IV31 216 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 ZNF689Q96CS4 500 aaPredicted RBP18.28■□□□□ 0.52
EPHB4-204ENST00000477446 FBXL18Q96ME1 805 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 ZFP42Q96MM3 310 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 GAD1Q99259 594 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 DUSP9Q99956 384 aaKnown RBP18.28■□□□□ 0.52
EPHB4-204ENST00000477446 COLQQ9Y215 455 aaPredicted RBP18.28■□□□□ 0.52
EPHB4-204ENST00000477446 ANK1P16157 1881 aa18.28■□□□□ 0.52
EPHB4-204ENST00000477446 LAMA2P24043 3122 aaKnown RBP18.27■□□□□ 0.52
EPHB4-204ENST00000477446 USP27XA6NNY8 438 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 EXOC3O60645 756 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 RPL13P26373 211 aaKnown RBP18.27■□□□□ 0.52
EPHB4-204ENST00000477446 RABGGTBP53611 331 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 HTRA4P83105 476 aaPredicted RBP18.27■□□□□ 0.52
EPHB4-204ENST00000477446 GLB1LQ6UWU2 654 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 ALKAL1Q6UXT8 129 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 CBWD2Q8IUF1 395 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 ABI1Q8IZP0 508 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 RDH13Q8NBN7 331 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 GSTCDQ8NEC7 633 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 EEF2KMTQ96G04 330 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 CASD1Q96PB1 797 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 SRRTQ9BXP5 876 aaKnown RBP18.27■□□□□ 0.52
EPHB4-204ENST00000477446 RPF1Q9H9Y2 349 aaKnown RBP18.27■□□□□ 0.52
EPHB4-204ENST00000477446 RC3H2Q9HBD1 1191 aaKnown RBP18.27■□□□□ 0.52
EPHB4-204ENST00000477446 KIAA1586Q9HCI6 787 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 TOPORSQ9NS56 1045 aaPredicted RBP18.27■□□□□ 0.52
EPHB4-204ENST00000477446 INPP5FQ9Y2H2 1132 aa18.27■□□□□ 0.52
EPHB4-204ENST00000477446 RALGAPA2Q2PPJ7 1873 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.26■□□□□ 0.51
EPHB4-204ENST00000477446 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.26■□□□□ 0.51
EPHB4-204ENST00000477446 TTC26A0AVF1 554 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 TBKBP1A7MCY6 615 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 CASP4P49662 377 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 FKBP3Q00688 224 aaKnown RBP18.26■□□□□ 0.51
EPHB4-204ENST00000477446 SNRNP35Q16560 246 aaKnown RBP18.26■□□□□ 0.51
EPHB4-204ENST00000477446 IRF2BP1Q8IU81 584 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 CSGALNACT2Q8N6G5 542 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 SNX27Q96L92 541 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 YME1L1Q96TA2 773 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 RAD9AQ99638 391 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 TMEM117Q9H0C3 514 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 MIOSQ9NXC5 875 aa18.26■□□□□ 0.51
EPHB4-204ENST00000477446 TDRD15B5MCY1 1934 aaKnown RBP18.26■□□□□ 0.51
EPHB4-204ENST00000477446 ZNF233A6NK53 670 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 LACTBL1A8MY62 500 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 RIOK3O14730 519 aaKnown RBP18.25■□□□□ 0.51
EPHB4-204ENST00000477446 INPPL1O15357 1258 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 TLL1O43897 1013 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 ADRB2P07550 413 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 POU5F1Q01860 360 aaKnown RBP18.25■□□□□ 0.51
EPHB4-204ENST00000477446 SYCP1Q15431 976 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 PAN2Q504Q3 1202 aaKnown RBP18.25■□□□□ 0.51
EPHB4-204ENST00000477446 XKR4Q5GH76 650 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 NOMO2Q5JPE7 1267 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 LRRC55Q6ZSA7 311 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 ZC3H3Q8IXZ2 948 aaKnown RBP18.25■□□□□ 0.51
EPHB4-204ENST00000477446 IQCDQ96DY2 449 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 FAM212AQ96EL1 285 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 PLEKHA5Q9HAU0 1116 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 RBAKQ9NYW8 714 aaPredicted RBP18.25■□□□□ 0.51
EPHB4-204ENST00000477446 INSL6Q9Y581 213 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 PDCD11Q14690 1871 aaKnown RBP18.25■□□□□ 0.51
EPHB4-204ENST00000477446 LGALS16A8MUM7 142 aa18.25■□□□□ 0.51
EPHB4-204ENST00000477446 PTGESO14684 152 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms