RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 SOX10P56693 466 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 PPARAQ07869 468 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 SERINC3Q13530 473 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 SF3B3Q15393 1217 aaKnown RBP3.83□□□□□ -1.8
XRN1-211ENST00000477237 CFAP100Q494V2 611 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 FAM47AQ5JRC9 791 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 KAZNQ674X7 775 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 CDCA2Q69YH5 1023 aaPredicted RBP3.83□□□□□ -1.8
XRN1-211ENST00000477237 ESPNLQ6ZVH7 1005 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 GLB1L2Q8IW92 636 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 IFT57Q9NWB7 429 aa3.83□□□□□ -1.8
XRN1-211ENST00000477237 PRSS38A1L453 326 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 CCDC151A5D8V7 595 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 CBX4O00257 560 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 YY2O15391 372 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 ORC4O43929 436 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 DNAJC8O75937 253 aaPredicted RBP3.82□□□□□ -1.8
XRN1-211ENST00000477237 PRSS23O95084 383 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 LATS1O95835 1130 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 GASTP01350 101 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 SNRPA1P09661 255 aaKnown RBP3.82□□□□□ -1.8
XRN1-211ENST00000477237 SNHG28P0DPA3 235 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 GCSHP23434 173 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 POLGP54098 1239 aaPredicted RBP3.82□□□□□ -1.8
XRN1-211ENST00000477237 GEN1Q17RS7 908 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 C2orf27AQ580R0 203 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 DLK2Q6UY11 383 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 ZDHHC17Q8IUH5 632 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 COLGALT2Q8IYK4 626 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 SMRP1Q8NCR6 262 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 REPS2Q8NFH8 660 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 PMFBP1Q8TBY8 1022 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 DENND1AQ8TEH3 1009 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 TFAP2BQ92481 460 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 NRIP3Q9NQ35 241 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 ANLNQ9NQW6 1124 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 MSRAQ9UJ68 235 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 TMPRSS11EQ9UL52 423 aa3.82□□□□□ -1.8
XRN1-211ENST00000477237 MTO1Q9Y2Z2 717 aaKnown RBP3.82□□□□□ -1.8
XRN1-211ENST00000477237 PPEF2O14830 753 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 MPPED1O15442 326 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 ATP2A2P16615 1042 aaKnown RBP3.81□□□□□ -1.8
XRN1-211ENST00000477237 CTSSP25774 331 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 CCKARP32238 428 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 MEF2AQ02078 507 aaPredicted RBP3.81□□□□□ -1.8
XRN1-211ENST00000477237 LRRC32Q14392 662 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 ZNF260Q3ZCT1 412 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 TMEM119Q4V9L6 283 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 NEK8Q86SG6 692 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 LYSMD2Q8IV50 215 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 LILRB2Q8N423 598 aa3.81□□□□□ -1.8
XRN1-211ENST00000477237 LCHNA4D1U4 455 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 GAS7O60861 476 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 ERN1O75460 977 aaKnown RBP3.8□□□□□ -1.8
XRN1-211ENST00000477237 SDSP20132 328 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 SLC6A2P23975 617 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 EPHB2P29323 1055 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 CRHR1P34998 444 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 MIDNQ504T8 468 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 FNDC3BQ53EP0 1204 aaKnown RBP3.8□□□□□ -1.8
XRN1-211ENST00000477237 VWA1Q6PCB0 445 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 FOXR2Q6PJQ5 311 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 PASD1Q8IV76 773 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 SLC41A1Q8IVJ1 513 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 NXPE1Q8N323 547 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 JMYQ8N9B5 988 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 PPP1R10Q96QC0 940 aaKnown RBP3.8□□□□□ -1.8
XRN1-211ENST00000477237 ELOVL5Q9NYP7 299 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 WWOXQ9NZC7 414 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 PRSS50Q9UI38 385 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 SIK3Q9Y2K2 1263 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 NUMBLQ9Y6R0 609 aa3.8□□□□□ -1.8
XRN1-211ENST00000477237 ATRNL1Q5VV63 1379 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 TRGV11A0A075B6L2 103 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 ERVV-2B6SEH9 535 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 TOP3BO95985 862 aaKnown RBP3.79□□□□□ -1.8
XRN1-211ENST00000477237 KRT10P13645 584 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 MPGP29372 298 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 PTPN7P35236 360 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 NEK4P51957 841 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 ZNF134P52741 427 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 TRIM25Q14258 630 aaKnown RBP3.79□□□□□ -1.8
XRN1-211ENST00000477237 KRTAP27-1Q3LI81 207 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 ZNF66Q6ZN08 573 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 YTHDF3Q7Z739 585 aaKnown RBP3.79□□□□□ -1.8
XRN1-211ENST00000477237 DRC7Q8IY82 874 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 ZBTB8BQ8NAP8 495 aaPredicted RBP3.79□□□□□ -1.8
XRN1-211ENST00000477237 ZNF480Q8WV37 535 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 CHTF18Q8WVB6 975 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 ANO3Q9BYT9 981 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 SEMA4CQ9C0C4 833 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 SPRTNQ9H040 489 aaPredicted RBP3.79□□□□□ -1.8
XRN1-211ENST00000477237 PRDM12Q9H4Q4 367 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 THG1LQ9NWX6 298 aaKnown RBP3.79□□□□□ -1.8
XRN1-211ENST00000477237 ST3GAL5Q9UNP4 418 aa3.79□□□□□ -1.8
XRN1-211ENST00000477237 IGKV2D-30A0A075B6S6 120 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 PPP1R12AO14974 1030 aaPredicted RBP3.78□□□□□ -1.8
XRN1-211ENST00000477237 KPNA6O60684 536 aa3.78□□□□□ -1.8
XRN1-211ENST00000477237 ALOX15P16050 662 aaPredicted RBP3.78□□□□□ -1.8
XRN1-211ENST00000477237 NR4A2P43354 598 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms