RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ARHGAP28Q9P2N2 729 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 PCYOX1Q9UHG3 505 aa17.64■□□□□ 0.41
TMEM53-208ENST00000476724 PPFIA2O75334 1257 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 CETPP11597 493 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 ACTR2P61160 394 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 DHX9Q08211 1270 aaKnown RBP17.63■□□□□ 0.41
TMEM53-208ENST00000476724 XKR3Q5GH77 459 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 CYFIP1Q7L576 1253 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 CCDC60Q8IWA6 550 aaPredicted RBP17.63■□□□□ 0.41
TMEM53-208ENST00000476724 MMP19Q99542 508 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 POP1Q99575 1024 aaKnown RBP17.63■□□□□ 0.41
TMEM53-208ENST00000476724 NUP85Q9BW27 656 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 DPH5Q9H2P9 285 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 SEPT9Q9UHD8 586 aaPredicted RBP17.63■□□□□ 0.41
TMEM53-208ENST00000476724 PCDHA3Q9Y5H8 950 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 MYH9P35579 1960 aaKnown RBP17.63■□□□□ 0.41
TMEM53-208ENST00000476724 GTF2A2P52657 109 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 ZNF844Q08AG5 666 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 ZNF677Q86XU0 584 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 JAMLQ86YT9 394 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 DDX1Q92499 740 aaKnown RBP17.63■□□□□ 0.41
TMEM53-208ENST00000476724 KRT35Q92764 455 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 ZNF653Q96CK0 615 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 BICD1Q96G01 975 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 PLVAPQ9BX97 442 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 ERVK-5Q9HDB9 667 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 XPNPEP1Q9NQW7 623 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 PARP2Q9UGN5 583 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 PNMA3Q9UL41 463 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 MTUS1Q9ULD2 1270 aa17.63■□□□□ 0.41
TMEM53-208ENST00000476724 DNAJC25-GNG10A0A024R161 153 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 TMEM110-MUSTN1A8MSY1 372 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 SOCS7O14512 581 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 EXTL3O43909 919 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 FLT3P36888 993 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 ATP1A2P50993 1020 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 CLDN10P78369 228 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 PRKCEQ02156 737 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 KCTD2Q14681 263 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 SPRYD7Q5W111 196 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.62■□□□□ 0.41
TMEM53-208ENST00000476724 ATP8B4Q8TF62 1192 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 TRIM51Q9BSJ1 452 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 TXLNGYQ9BZA5 131 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 PLXNB2O15031 1838 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 SPOPO43791 374 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 DLATP10515 647 aaKnown RBP17.62■□□□□ 0.41
TMEM53-208ENST00000476724 UBA1P22314 1058 aaKnown RBP17.62■□□□□ 0.41
TMEM53-208ENST00000476724 MDH1P40925 334 aaKnown RBP17.62■□□□□ 0.41
TMEM53-208ENST00000476724 BPIFB4P59827 614 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 PDCLQ13371 301 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 CYP1B1Q16678 543 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 C15orf39Q6ZRI6 1047 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 DHX38Q92620 1227 aaKnown RBP17.62■□□□□ 0.41
TMEM53-208ENST00000476724 MAGOHBQ96A72 148 aaKnown RBP17.62■□□□□ 0.41
TMEM53-208ENST00000476724 PTPN18Q99952 460 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 C1orf112Q9NSG2 853 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 ZDHHC18Q9NUE0 388 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 LCMT1Q9UIC8 334 aa17.62■□□□□ 0.41
TMEM53-208ENST00000476724 ADGRA3Q8IWK6 1321 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 TRPM7Q96QT4 1865 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 ITGBL1O95965 494 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-208ENST00000476724 SUPT20HL2P0C7V6 817 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 PTGIRP43119 386 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 CCT5P48643 541 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 RWDD2BP57060 319 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 STRN3Q13033 797 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 ADAT2Q7Z6V5 191 aaKnown RBP17.61■□□□□ 0.41
TMEM53-208ENST00000476724 PRELID2Q8N945 189 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 TATDN2Q93075 761 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 TRIM11Q96F44 468 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 FAM213AQ9BRX8 229 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 FAM129AQ9BZQ8 928 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 POLR3FQ9H1D9 316 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-208ENST00000476724 EPN3Q9H201 632 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 MROH8Q9H579 483 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 STYXL1Q9Y6J8 313 aa17.61■□□□□ 0.41
TMEM53-208ENST00000476724 LSP1P33241 339 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 COPB2P35606 906 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 LIG4P49917 911 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 SOX10P56693 466 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 CORO7P57737 925 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 PSMD6Q15008 389 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 CLEC16AQ2KHT3 1053 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 WDR44Q5JSH3 913 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 SLFN12LQ6IEE8 588 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 B4GALNT4Q76KP1 1039 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 SPATS2Q86XZ4 545 aaKnown RBP17.6■□□□□ 0.41
TMEM53-208ENST00000476724 TOPORSQ9NS56 1045 aaPredicted RBP17.6■□□□□ 0.41
TMEM53-208ENST00000476724 PLXNA1Q9UIW2 1896 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 MYO1FO00160 1098 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 ATG7O95352 703 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 ARIH2O95376 493 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 MYBL1P10243 752 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 TAS1R3Q7RTX0 852 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 SLC13A5Q86YT5 568 aaPredicted RBP17.6■□□□□ 0.41
TMEM53-208ENST00000476724 GPRC5AQ8NFJ5 357 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 GLG1Q92896 1179 aa17.6■□□□□ 0.41
TMEM53-208ENST00000476724 FNBP1Q96RU3 617 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms