RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 FAM186AA6NE01 2351 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 PHLPP2Q6ZVD8 1323 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 VWA8A3KMH1 1905 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 LAMTOR5O43504 91 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 GLULP15104 373 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 TKTP29401 623 aaKnown RBP11.9□□□□□ -0.5
CDRT1-205ENST00000475944 MAGEA9P43362 315 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDRT1-205ENST00000475944 ST3GAL1Q11201 340 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 UBXN2BQ14CS0 331 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 ZNF568Q3ZCX4 644 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 SLC44A4Q53GD3 710 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 TTC38Q5R3I4 469 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 NT5DC1Q5TFE4 455 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 DDX27Q96GQ7 796 aaKnown RBP11.9□□□□□ -0.5
CDRT1-205ENST00000475944 BORCS6Q96GS4 357 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 OSBPL6Q9BZF3 934 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 RAB34Q9BZG1 259 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 GOLGA2P5Q9HBQ8 144 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 SLC38A7Q9NVC3 462 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 GDE1Q9NZC3 331 aa11.9□□□□□ -0.5
CDRT1-205ENST00000475944 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.5
CDRT1-205ENST00000475944 MRPS23Q9Y3D9 190 aaKnown RBP11.9□□□□□ -0.5
CDRT1-205ENST00000475944 DMDP11532 3685 aa11.9□□□□□ -0.51
CDRT1-205ENST00000475944 VPS13AQ96RL7 3174 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 SMIM28A0A1B0GU29 152 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 KINO60870 393 aaKnown RBP11.89□□□□□ -0.51
CDRT1-205ENST00000475944 LRRN2O75325 713 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 LRG1P02750 347 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 RHOP08100 348 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 ELF1P32519 619 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 GRM5P41594 1212 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 BRCC3P46736 316 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 HMGN5P82970 282 aaKnown RBP11.89□□□□□ -0.51
CDRT1-205ENST00000475944 DMP1Q13316 513 aaPredicted RBP11.89□□□□□ -0.51
CDRT1-205ENST00000475944 ECM1Q16610 540 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 ZNF528Q3MIS6 628 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 SLC8B1Q6J4K2 584 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 CCDC83Q8IWF9 413 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 SNX29Q8TEQ0 813 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 ING5Q8WYH8 240 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 RUBCNQ92622 972 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 KXD1Q9BQD3 176 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 LLPHQ9BRT6 129 aaKnown RBP11.89□□□□□ -0.51
CDRT1-205ENST00000475944 MRPL4Q9BYD3 311 aaKnown RBP11.89□□□□□ -0.51
CDRT1-205ENST00000475944 CDT1Q9H211 546 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 POLD4Q9HCU8 107 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 LTB4R2Q9NPC1 389 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 AVENQ9NQS1 362 aaPredicted RBP11.89□□□□□ -0.51
CDRT1-205ENST00000475944 DDX19AQ9NUU7 478 aaKnown RBP11.89□□□□□ -0.51
CDRT1-205ENST00000475944 SPATA6Q9NWH7 488 aaPredicted RBP11.89□□□□□ -0.51
CDRT1-205ENST00000475944 LRWD1Q9UFC0 647 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 FBXO4Q9UKT5 387 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 LIMCH1Q9UPQ0 1083 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 KIAA1024Q9UPX6 916 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 RIF1Q5UIP0 2472 aaKnown RBP11.89□□□□□ -0.51
CDRT1-205ENST00000475944 MIA3Q5JRA6 1907 aa11.89□□□□□ -0.51
CDRT1-205ENST00000475944 ARHGEF37A1IGU5 675 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 FAM170BA6NMN3 283 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 CCDC169A6NNP5 214 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 I3L4J1 428 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 PRRG1O14668 218 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 SYN3O14994 580 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 NCAM2O15394 837 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 ECI2O75521 394 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 PTPN2P17706 415 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 NPTX2P47972 431 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 PEX3P56589 373 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 ROR1Q01973 937 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 PDIA5Q14554 519 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 XKR4Q5GH76 650 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 VARS2Q5ST30 1063 aaKnown RBP11.88□□□□□ -0.51
CDRT1-205ENST00000475944 ZBTB41Q5SVQ8 909 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 CD300LGQ6UXG3 332 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 KIAA2013Q8IYS2 634 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 MAML2Q8IZL2 1156 aaPredicted RBP11.88□□□□□ -0.51
CDRT1-205ENST00000475944 CEP120Q8N960 986 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 FAM184AQ8NB25 1140 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 C3orf58Q8NDZ4 430 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 FBXO18Q8NFZ0 1043 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 ZNF461Q8TAF7 563 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 NELL2Q99435 816 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 ACO2Q99798 780 aaKnown RBP11.88□□□□□ -0.51
CDRT1-205ENST00000475944 TMEM134Q9H6X4 195 aa11.88□□□□□ -0.51
CDRT1-205ENST00000475944 RBM19Q9Y4C8 960 aaKnown RBP11.88□□□□□ -0.51
CDRT1-205ENST00000475944 H7C4K7 107 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 PODXLO00592 558 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 ZNF197O14709 1029 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 SPTLC1O15269 473 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 ABLIM3O94929 683 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 MCF2P10911 925 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 ATF2P15336 505 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 IGFBP6P24592 240 aaPredicted RBP11.87□□□□□ -0.51
CDRT1-205ENST00000475944 OSTNP61366 133 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 SOX4Q06945 474 aaPredicted RBP11.87□□□□□ -0.51
CDRT1-205ENST00000475944 SLC5A9Q2M3M2 681 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 ALKAL1Q6UXT8 129 aa11.87□□□□□ -0.51
CDRT1-205ENST00000475944 TPRG1Q6ZUI0 275 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms