RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 PDZD4Q76G19 769 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-212ENST00000475684 CAMKK1Q8N5S9 505 aa11.17□□□□□ -0.62
CCHCR1-212ENST00000475684 ZSCAN18Q8TBC5 510 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-212ENST00000475684 IGDCC4Q8TDY8 1250 aa11.17□□□□□ -0.62
CCHCR1-212ENST00000475684 UBL7Q96S82 380 aaPredicted RBP11.17□□□□□ -0.62
CCHCR1-212ENST00000475684 PAAF1Q9BRP4 392 aa11.17□□□□□ -0.62
CCHCR1-212ENST00000475684 MINDY3Q9H8M7 445 aa11.17□□□□□ -0.62
CCHCR1-212ENST00000475684 GIT1Q9Y2X7 761 aa11.17□□□□□ -0.62
CCHCR1-212ENST00000475684 CHADO15335 359 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 MAFO75444 373 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 C1QL1O75973 258 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 GBP1P32455 592 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 CCR2P41597 374 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 MAPK8P45983 427 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 SETQ01105 290 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 SPIRE1Q08AE8 756 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 GRIK3Q13003 919 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 AP3B2Q13367 1082 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 KARSQ15046 597 aaKnown RBP11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 CYP4A22Q5TCH4 519 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 SRGAP1Q7Z6B7 1085 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 RAB44Q7Z6P3 723 aaPredicted RBP11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 HACE1Q8IYU2 909 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 GSTCDQ8NEC7 633 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 MDM1Q8TC05 714 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 E2F7Q96AV8 911 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 CEP89Q96ST8 783 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 TRPV4Q9HBA0 871 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 COL4A3BPQ9Y5P4 624 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 CDY1Q9Y6F8 540 aa11.16□□□□□ -0.62
CCHCR1-212ENST00000475684 NCANO14594 1321 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 PDCD11Q14690 1871 aaKnown RBP11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 SMCO2A6NFE2 343 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 TK2O00142 265 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 PRRG1O14668 218 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 CHMP2AO43633 222 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 ERLIN2O94905 339 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 KIF4AO95239 1232 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 CYP3A4P08684 503 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 CALM1P0DP23 149 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 CALM2P0DP24 149 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 CALM3P0DP25 149 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 RXRAP19793 462 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 AKAP5P24588 427 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 ELF1P32519 619 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 HNRNPUQ00839 825 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 LMAN2Q12907 356 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 ZNF423Q2M1K9 1284 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 XKR3Q5GH77 459 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 NFXL1Q6ZNB6 911 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 PIP4P1Q86T03 277 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 TEX2Q8IWB9 1127 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 NCOA7Q8NI08 942 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 JPH2Q9BR39 696 aaPredicted RBP11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 TRIM6Q9C030 488 aaPredicted RBP11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 GTSE1Q9NYZ3 720 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 KLK14Q9P0G3 267 aa11.15□□□□□ -0.62
CCHCR1-212ENST00000475684 TDRD15B5MCY1 1934 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 CCDC194A0A1B0GVG4 234 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 ARHGEF37A1IGU5 675 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 CASTOR2A6NHX0 329 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 DDX11L8A8MPP1 907 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 GJA1P17302 382 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 SFNP31947 248 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 CLK2P49760 499 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 ANTXR2P58335 489 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 NCBP1Q09161 790 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 ELAVL2Q12926 359 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 PRR16Q569H4 304 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 JAKMIP3Q5VZ66 844 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 TYW1BQ6NUM6 668 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 PPP1R18Q6NYC8 613 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 CYP2U1Q7Z449 544 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 PRPF31Q8WWY3 499 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 RSPRY1Q96DX4 576 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 CPB2Q96IY4 423 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 HHIPQ96QV1 700 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 HNRNPABQ99729 332 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 CSRNP2Q9H175 543 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 NXF3Q9H4D5 531 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 POLR3BQ9NW08 1133 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 SNTG2Q9NY99 539 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 MTRRQ9UBK8 725 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 INVSQ9Y283 1065 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 CELSR3Q9NYQ7 3312 aa11.14□□□□□ -0.63
CCHCR1-212ENST00000475684 CCDC69A6NI79 296 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 E7EWF7 191 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 CCER2I3L3R5 266 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 J3QKU1 62 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 HIP1O00291 1037 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 TSPAN1O60635 241 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 STBD1O95210 358 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 CYP21A2P08686 494 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 MYL4P12829 197 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 AXLP30530 894 aa11.13□□□□□ -0.63
CCHCR1-212ENST00000475684 TIE1P35590 1138 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms