RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 ANAPC5Q9UJX4 755 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 H0Y3Z8 333 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 POLRMTO00411 1230 aaKnown RBP18.9■□□□□ 0.62
CCM2-207ENST00000475551 NVLO15381 856 aaKnown RBP18.9■□□□□ 0.62
CCM2-207ENST00000475551 CLDN3O15551 220 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 EDF1O60869 148 aaKnown RBP18.9■□□□□ 0.62
CCM2-207ENST00000475551 FAM13AO94988 1023 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 CYP1A2P05177 515 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 MARK3P27448 753 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 VHLP40337 213 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 EIF6P56537 245 aaKnown RBP18.9■□□□□ 0.62
CCM2-207ENST00000475551 COG2Q14746 738 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 PRR16Q569H4 304 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 HS2ST1Q7LGA3 356 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 C10orf82Q8WW14 230 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 TRAPPC9Q96Q05 1148 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 PIDD1Q9HB75 910 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 DNAJC17Q9NVM6 304 aaKnown RBP18.9■□□□□ 0.62
CCM2-207ENST00000475551 DLGAP2Q9P1A6 1054 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 CHORDC1Q9UHD1 332 aaPredicted RBP18.9■□□□□ 0.62
CCM2-207ENST00000475551 LRCH1Q9Y2L9 728 aa18.9■□□□□ 0.62
CCM2-207ENST00000475551 SIGLEC16A6NMB1 481 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 SFI1A8K8P3 1242 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 PRPF4O43172 522 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCM2-207ENST00000475551 ENTPD5O75356 428 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 SERPINB2P05120 415 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 MMP10P09238 476 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 AKR1B1P15121 316 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 ATF2P15336 505 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 SLC16A2P36021 539 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 ARHGAP4P98171 946 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 AP3B2Q13367 1082 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 SPARCL1Q14515 664 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 ZC2HC1CQ53FD0 456 aaPredicted RBP18.89■□□□□ 0.61
CCM2-207ENST00000475551 TPTE2Q6XPS3 522 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 CPNE8Q86YQ8 564 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 MYCT1Q8N699 235 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 MAIP1Q8WWC4 291 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 FAM20AQ96MK3 541 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 PCDHB18PQ96TA0 734 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 PAIP2Q9BPZ3 127 aaKnown RBP18.89■□□□□ 0.61
CCM2-207ENST00000475551 NUP85Q9BW27 656 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 NYXQ9GZU5 481 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 UBE2TQ9NPD8 197 aaPredicted RBP18.89■□□□□ 0.61
CCM2-207ENST00000475551 NMRK1Q9NWW6 199 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 GAS8O95995 478 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 ADCY1Q08828 1119 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 BFSP1Q12934 665 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 PPP1R15BQ5SWA1 713 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 ZNF449Q6P9G9 518 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 LRRC8CQ8TDW0 803 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 SAR1AQ9NR31 198 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 AGPAT3Q9NRZ7 376 aa18.89■□□□□ 0.61
CCM2-207ENST00000475551 A0A1W2PRG0 241 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 ABHD2P08910 425 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 GSTA2P09210 222 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 POLD1P28340 1107 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 RFC5P40937 340 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 CYP2J2P51589 502 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 GABPAQ06546 454 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 PDK4Q16654 411 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 SLC45A4Q5BKX6 768 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 ZNF746Q6NUN9 644 aaPredicted RBP18.88■□□□□ 0.61
CCM2-207ENST00000475551 TRABD2AQ86V40 505 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 LENG9Q96B70 501 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 BTBD6Q96KE9 485 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 CHST7Q9NS84 486 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 UVRAGQ9P2Y5 699 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 CBX6O95503 412 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 C4orf50Q6ZRC1 276 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 BBOF1Q8ND07 529 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 KIFAP3Q92845 792 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 SCOCQ9UIL1 159 aa18.88■□□□□ 0.61
CCM2-207ENST00000475551 ATMINO43313 823 aaPredicted RBP18.87■□□□□ 0.61
CCM2-207ENST00000475551 OCRLQ01968 901 aa18.87■□□□□ 0.61
CCM2-207ENST00000475551 CYP4A11Q02928 519 aa18.87■□□□□ 0.61
CCM2-207ENST00000475551 TMED2Q15363 201 aa18.87■□□□□ 0.61
CCM2-207ENST00000475551 DPP8Q6V1X1 898 aaPredicted RBP18.87■□□□□ 0.61
CCM2-207ENST00000475551 FAM163AQ96GL9 167 aaPredicted RBP18.87■□□□□ 0.61
CCM2-207ENST00000475551 FIZ1Q96SL8 496 aa18.87■□□□□ 0.61
CCM2-207ENST00000475551 PARVGQ9HBI0 331 aa18.87■□□□□ 0.61
CCM2-207ENST00000475551 SLCO1B3Q9NPD5 702 aa18.87■□□□□ 0.61
CCM2-207ENST00000475551 GTF3C4Q9UKN8 822 aa18.87■□□□□ 0.61
CCM2-207ENST00000475551 ZBTB7AO95365 584 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 ADCY8P40145 1251 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 PRR5LQ6MZQ0 368 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 STXBP4Q6ZWJ1 553 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 ZNF720Q7Z2F6 126 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 CLEC10AQ8IUN9 316 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 SLC9A9Q8IVB4 645 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 ARHGEF19Q8IW93 802 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 SPOCK2Q92563 424 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 EIF2AK1Q9BQI3 630 aaKnown RBP18.86■□□□□ 0.61
CCM2-207ENST00000475551 CYLDQ9NQC7 956 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 SEL1LQ9UBV2 794 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 SMG5Q9UPR3 1016 aaKnown RBP18.86■□□□□ 0.61
CCM2-207ENST00000475551 MEIS2O14770 477 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 SKIP12755 728 aa18.86■□□□□ 0.61
CCM2-207ENST00000475551 KHDC1Q4VXA5 237 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms