RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PDZD7Q9H5P4 517 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 CDHR5Q9HBB8 845 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 FAM207AQ9NSI2 230 aaPredicted RBP7.17□□□□□ -1.26
ATG4A-207ENST00000474825 GCNT4Q9P109 453 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 APEX2Q9UBZ4 518 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 OGDHLQ9ULD0 1010 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 PHF24Q9UPV7 400 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 SQORQ9Y6N5 450 aa7.17□□□□□ -1.26
ATG4A-207ENST00000474825 SSU72P8A0A1W2PR75 194 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 MEFVO15553 781 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-207ENST00000474825 NRDCO43847 1150 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 IL18RAPO95256 599 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 ACTN1P12814 892 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 ANXA13P27216 316 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 GRM5P41594 1212 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 GCLMP48507 274 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 ACOT2P49753 483 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 MXI1P50539 228 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 MRPS6P82932 125 aaKnown RBP7.16□□□□□ -1.26
ATG4A-207ENST00000474825 CETN1Q12798 172 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 ITGA7Q13683 1181 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 ENOX2Q16206 610 aaKnown RBP7.16□□□□□ -1.26
ATG4A-207ENST00000474825 KIZQ2M2Z5 673 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 DCAF4L1Q3SXM0 396 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 XKR4Q5GH76 650 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-207ENST00000474825 PHLDB3Q6NSJ2 640 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 ALKAL1Q6UXT8 129 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 RAD9BQ6WBX8 426 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 NT5DC4Q86YG4 428 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 WDR49Q8IV35 697 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 FMNL3Q8IVF7 1028 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 ARRDC4Q8NCT1 418 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 FBXL13Q8NEE6 735 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 CXorf38Q8TB03 319 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 HELQQ8TDG4 1101 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 CPLX3Q8WVH0 158 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 TMEM40Q8WWA1 233 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 SEMA4DQ92854 862 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 WNT8BQ93098 351 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 JAKMIP2Q96AA8 810 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 FAM81BQ96LP2 452 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 TSPAN18Q96SJ8 248 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 CHP1Q99653 195 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 CGRRF1Q99675 332 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 SYT11Q9BT88 431 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 STK33Q9BYT3 514 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 GPR88Q9GZN0 384 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 SENP6Q9GZR1 1112 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-207ENST00000474825 ASB7Q9H672 318 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 PLEKHA5Q9HAU0 1116 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 PDE11AQ9HCR9 933 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 RAB20Q9NX57 234 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 RBAKQ9NYW8 714 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-207ENST00000474825 TRPV2Q9Y5S1 764 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 PTPRJQ12913 1337 aa7.16□□□□□ -1.26
ATG4A-207ENST00000474825 LRRC53A6NM62 1247 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 EIF3CLB5ME19 914 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 DNM1LO00429 736 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 CSDE1O75534 798 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 GFPT2O94808 682 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 VNN1O95497 513 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 STAU1O95793 577 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 CHRNA1P02708 482 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 STAG3L1P0CL83 205 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 CAPN2P17655 700 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 MSNP26038 577 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 CLCN1P35523 988 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 TNFSF9P41273 254 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 POLR2FP61218 127 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 APBA1Q02410 837 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 GCNT1Q02742 428 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 ZBTB6Q15916 424 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 SLC10A6Q3KNW5 377 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 ZNF568Q3ZCX4 644 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 SLC9C1Q4G0N8 1177 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 PKDCCQ504Y2 493 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 UBXN11Q5T124 520 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 TDRD10Q5VZ19 366 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 IQCEQ6IPM2 695 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 NOTUMQ6P988 496 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 SLC27A1Q6PCB7 646 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 RRAGAQ7L523 313 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 ENOSF1Q7L5Y1 443 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 RSPH3Q86UC2 560 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 FAM228AQ86W67 206 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 CD302Q8IX05 232 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 REXO1L1PQ8IX06 675 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 CCAR2Q8N163 923 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 CEP120Q8N960 986 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 TAS1R2Q8TE23 839 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 DHX38Q92620 1227 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 ZNF668Q96K58 619 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 PCMTD1Q96MG8 357 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 GLT1D1Q96MS3 346 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 FNBP1Q96RU3 617 aa7.15□□□□□ -1.26
ATG4A-207ENST00000474825 POP1Q99575 1024 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 EIF3CQ99613 913 aaKnown RBP7.15□□□□□ -1.26
ATG4A-207ENST00000474825 OSMRQ99650 979 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms