RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 PIGSQ96S52 555 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 AGPAT1Q99943 283 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 HINFPQ9BQA5 517 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 SYT11Q9BT88 431 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 EPB41L4BQ9H329 900 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 SIX2Q9NPC8 291 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 PAPOLBQ9NRJ5 636 aaKnown RBP8.55□□□□□ -1.04
CCDC93-208ENST00000474546 GPRC5DQ9NZD1 345 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ADAM22Q9P0K1 906 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 SLC24A2Q9UI40 661 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 KCNG1Q9UIX4 513 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 DNAJC12Q9UKB3 198 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 GTF3C4Q9UKN8 822 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ANGPTL2Q9UKU9 493 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 SNX24Q9Y343 169 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 ALG6Q9Y672 507 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 CFAP54Q96N23 3096 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 CDH23Q9H251 3354 aa8.55□□□□□ -1.04
CCDC93-208ENST00000474546 COL11A2P13942 1736 aaPredicted RBP8.54□□□□□ -1.04
CCDC93-208ENST00000474546 MAGEA13PA6NCF6 341 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 TM9SF1O15321 606 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 SPOPO43791 374 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 SLC37A4O43826 429 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 TDP2O95551 362 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ALDH1A1P00352 501 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 IL1BP01584 269 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 USP17L8P0C7I0 530 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 SETSIPP0DME0 302 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 SLC9A1P19634 815 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ATP4AP20648 1035 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 CIITAP33076 1130 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 RPL21P46778 160 aaKnown RBP8.54□□□□□ -1.04
CCDC93-208ENST00000474546 MFAP3P55082 362 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 BPIFB4P59827 614 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 MCCD1P59942 119 aaPredicted RBP8.54□□□□□ -1.04
CCDC93-208ENST00000474546 XIAPP98170 497 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ARHGAP4P98171 946 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ZNF543Q08ER8 600 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 KCTD2Q14681 263 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 DRAP1Q14919 205 aaPredicted RBP8.54□□□□□ -1.04
CCDC93-208ENST00000474546 NFIXQ14938 502 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 LRRC41Q15345 812 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 CCDC6Q16204 474 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 PDK4Q16654 411 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 WDR78Q5VTH9 848 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 FAM91A1Q658Y4 838 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 NAIF1Q69YI7 327 aaPredicted RBP8.54□□□□□ -1.04
CCDC93-208ENST00000474546 CWF19L1Q69YN2 538 aaKnown RBP8.54□□□□□ -1.04
CCDC93-208ENST00000474546 DPY19L2P1Q6NXN4 242 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 INTS5Q6P9B9 1019 aaKnown RBP8.54□□□□□ -1.04
CCDC93-208ENST00000474546 MTHFD1LQ6UB35 978 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 TPTE2Q6XPS3 522 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ZNF365Q70YC5 407 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 PCGF5Q86SE9 256 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ZNF677Q86XU0 584 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 PRELID2Q8N945 189 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 MDM1Q8TC05 714 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 LRRC8CQ8TDW0 803 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ASAP3Q8TDY4 903 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 HAS1Q92839 578 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 GFM2Q969S9 779 aaKnown RBP8.54□□□□□ -1.04
CCDC93-208ENST00000474546 PPP1R14BQ96C90 147 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 MAML3Q96JK9 1138 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 SMC6Q96SB8 1091 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 TRIM51Q9BSJ1 452 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 CELF4Q9BZC1 486 aaKnown RBP8.54□□□□□ -1.04
CCDC93-208ENST00000474546 PARVGQ9HBI0 331 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 KCNK9Q9NPC2 374 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ABCF3Q9NUQ8 709 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 MTMR4Q9NYA4 1195 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 TBC1D7Q9P0N9 293 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ZNF212Q9UDV6 495 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 ASIC3Q9UHC3 531 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 SNED1Q8TER0 1413 aa8.54□□□□□ -1.04
CCDC93-208ENST00000474546 USP17L3A6NCW0 530 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 USP17L4A6NCW7 530 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 F8W8V4 182 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 C2CD2LO14523 706 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 OPLAHO14841 1288 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 NVLO15381 856 aaKnown RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 PSTPIP1O43586 416 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 ZC3H11AO75152 810 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 CSDE1O75534 798 aaKnown RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 AKAP3O75969 853 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 RTN3O95197 1032 aaPredicted RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 GCNT3O95395 438 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 TGDSO95455 350 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 MYCNP04198 464 aaPredicted RBP8.53□□□□□ -1.04
CCDC93-208ENST00000474546 CYP1A2P05177 515 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 CYP3A4P08684 503 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 KRT16P08779 473 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 GNAZP19086 355 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 GTF2H1P32780 548 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 FLT3P36888 993 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 PEX5P50542 639 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 KCNJ2P63252 427 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 SREBF2Q12772 1141 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 CUL3Q13618 768 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 TRADDQ15628 312 aa8.53□□□□□ -1.04
CCDC93-208ENST00000474546 SEPT7Q16181 437 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms