RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 EFCAB12Q6NXP0 572 aa5.73□□□□□ -1.49
SSB-210ENST00000474273 SLC44A3Q8N4M1 653 aa5.73□□□□□ -1.49
SSB-210ENST00000474273 SCARB1Q8WTV0 552 aa5.73□□□□□ -1.49
SSB-210ENST00000474273 COG1Q8WTW3 980 aa5.73□□□□□ -1.49
SSB-210ENST00000474273 SMG7Q92540 1137 aaKnown RBP5.73□□□□□ -1.49
SSB-210ENST00000474273 ACE2Q9BYF1 805 aaPredicted RBP5.73□□□□□ -1.49
SSB-210ENST00000474273 FAM126AQ9BYI3 521 aaPredicted RBP5.73□□□□□ -1.49
SSB-210ENST00000474273 DNAJC28Q9NX36 388 aa5.73□□□□□ -1.49
SSB-210ENST00000474273 RNF181Q9P0P0 153 aa5.73□□□□□ -1.49
SSB-210ENST00000474273 RNF7Q9UBF6 113 aa5.73□□□□□ -1.49
SSB-210ENST00000474273 MCM8Q9UJA3 840 aa5.73□□□□□ -1.49
SSB-210ENST00000474273 MAP3K2Q9Y2U5 619 aa5.73□□□□□ -1.49
SSB-210ENST00000474273 ARHGEF17Q96PE2 2063 aaPredicted RBP5.73□□□□□ -1.49
SSB-210ENST00000474273 PTPN7P35236 360 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 SLC5A3P53794 718 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 MXRA7P84157 204 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 BMT2Q1RMZ1 405 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 MST1LQ2TV78 715 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 FAM47AQ5JRC9 791 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 PRAMEF14Q5SWL7 426 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 FAM102AQ5T9C2 384 aaPredicted RBP5.72□□□□□ -1.49
SSB-210ENST00000474273 METRNLQ641Q3 311 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 DDX42Q86XP3 938 aaKnown RBP eCLIP5.72□□□□□ -1.49
SSB-210ENST00000474273 OR7D4Q8NG98 312 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 CEP95Q96GE4 821 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 BCO1Q9HAY6 547 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 SEMA4GQ9NTN9 838 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 RBM12Q9NTZ6 932 aaKnown RBP5.72□□□□□ -1.49
SSB-210ENST00000474273 POGKQ9P215 609 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 WASHC2AQ641Q2 1341 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 SALL3Q9BXA9 1300 aa5.72□□□□□ -1.49
SSB-210ENST00000474273 CADPSQ9ULU8 1353 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 DNAJC9-AS1A6NH13 148 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 K7ESF4 209 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 CDKL5O76039 1030 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 FOSP01100 380 aaPredicted RBP5.71□□□□□ -1.5
SSB-210ENST00000474273 GSPT1P15170 499 aaKnown RBP5.71□□□□□ -1.5
SSB-210ENST00000474273 FDXRP22570 491 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 ECHS1P30084 290 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 FLT3LGP49771 235 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 PER3P56645 1201 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 ERVK-21P61565 698 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 SIM1P81133 766 aaPredicted RBP5.71□□□□□ -1.5
SSB-210ENST00000474273 SCAPQ12770 1279 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 ZNF169Q14929 603 aaPredicted RBP5.71□□□□□ -1.5
SSB-210ENST00000474273 MFSD14BQ5SR56 506 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 RNF187Q5TA31 235 aaPredicted RBP5.71□□□□□ -1.5
SSB-210ENST00000474273 Q6ZVL8 140 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 REPS2Q8NFH8 660 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 ADI1Q9BV57 179 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 PUS7LQ9H0K6 701 aaKnown RBP5.71□□□□□ -1.5
SSB-210ENST00000474273 KIAA1586Q9HCI6 787 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 SLC5A4Q9NY91 659 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 SCOCQ9UIL1 159 aa5.71□□□□□ -1.5
SSB-210ENST00000474273 USP15Q9Y4E8 981 aaPredicted RBP5.71□□□□□ -1.5
SSB-210ENST00000474273 SBNO2Q9Y2G9 1366 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 ADCY6O43306 1168 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 C1QL1O75973 258 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 CFIP05156 583 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 CTGFP29279 349 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 MTNR1BP49286 362 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 MALLQ13021 153 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 NOMO1Q15155 1222 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 RNF169Q8NCN4 708 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 ZFP28Q8NHY6 868 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 ZNF384Q8TF68 577 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 TFAP2CQ92754 450 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 UHRF1Q96T88 793 aaPredicted RBP5.7□□□□□ -1.5
SSB-210ENST00000474273 NEU1Q99519 415 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 CCM2LQ9NUG4 571 aaPredicted RBP5.7□□□□□ -1.5
SSB-210ENST00000474273 ATP8A1Q9Y2Q0 1164 aa5.7□□□□□ -1.5
SSB-210ENST00000474273 MCAMP43121 646 aa5.69□□□□□ -1.5
SSB-210ENST00000474273 RARRES1P49788 294 aa5.69□□□□□ -1.5
SSB-210ENST00000474273 CLRN1P58418 232 aa5.69□□□□□ -1.5
SSB-210ENST00000474273 PPP3CAQ08209 521 aa5.69□□□□□ -1.5
SSB-210ENST00000474273 KLF1Q13351 362 aaPredicted RBP5.69□□□□□ -1.5
SSB-210ENST00000474273 AMOTL1Q8IY63 956 aa5.69□□□□□ -1.5
SSB-210ENST00000474273 TRMT2AQ8IZ69 625 aaKnown RBP5.69□□□□□ -1.5
SSB-210ENST00000474273 PCDHGA2Q9Y5H1 932 aa5.69□□□□□ -1.5
SSB-210ENST00000474273 GPR45Q9Y5Y3 372 aa5.69□□□□□ -1.5
SSB-210ENST00000474273 PJA2O43164 708 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 OSMP13725 252 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 IL2RBP14784 551 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 SREBF1P36956 1147 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 SP140Q13342 867 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 ZNF572Q7Z3I7 529 aaPredicted RBP5.68□□□□□ -1.5
SSB-210ENST00000474273 C1QL2Q7Z5L3 287 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 NECAB2Q7Z6G3 386 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 GPR149Q86SP6 731 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 ARHGEF25Q86VW2 580 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 PQLC1Q8N2U9 271 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 CNTD1Q8N815 330 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 C9orf106Q8NAJ2 232 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 SLC35B2Q8TB61 432 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 Q96MF0 132 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 C1QTNF7Q9BXJ2 289 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 DMRT3Q9NQL9 472 aa5.68□□□□□ -1.5
SSB-210ENST00000474273 CXorf49A8MYA2 514 aaPredicted RBP5.67□□□□□ -1.5
SSB-210ENST00000474273 MGST3O14880 152 aa5.67□□□□□ -1.5
SSB-210ENST00000474273 SNRPA1P09661 255 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms