RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 HDAC7Q8WUI4 952 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 RAD54LQ92698 747 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 KCNN1Q92952 543 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 RTP3Q9BQQ7 232 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 REEP2Q9BRK0 252 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 PAAF1Q9BRP4 392 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 RHOBTB2Q9BYZ6 727 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 GPR62Q9BZJ7 368 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 ZSCAN16Q9H4T2 348 aaPredicted RBP17.84■□□□□ 0.45
CPA4-205ENST00000474254 CHST7Q9NS84 486 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 LARSQ9P2J5 1176 aaKnown RBP17.84■□□□□ 0.45
CPA4-205ENST00000474254 DOCK8Q8NF50 2099 aa17.84■□□□□ 0.45
CPA4-205ENST00000474254 DOCK6Q96HP0 2047 aa17.83■□□□□ 0.45
CPA4-205ENST00000474254 SF3B1O75533 1304 aaKnown RBP eCLIP17.83■□□□□ 0.44
CPA4-205ENST00000474254 CASTOR2A6NHX0 329 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 KIF4AO95239 1232 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 SPATA31D3P0C874 917 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 MCF2P10911 925 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 MARCKSP29966 332 aaPredicted RBP17.83■□□□□ 0.44
CPA4-205ENST00000474254 ZNF131P52739 623 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 NCKAP1LP55160 1127 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 STRN3Q13033 797 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 MCM6Q14566 821 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 MPZL3Q6UWV2 235 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 SPATA31D4Q6ZUB0 917 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 GLYCTKQ8IVS8 523 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 GPR65Q8IYL9 337 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 RABGGTAQ92696 567 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 PPP1R10Q96QC0 940 aaKnown RBP17.83■□□□□ 0.44
CPA4-205ENST00000474254 USP28Q96RU2 1077 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 CCDC94Q9BW85 323 aaPredicted RBP17.83■□□□□ 0.44
CPA4-205ENST00000474254 PLEKHA4Q9H4M7 779 aa17.83■□□□□ 0.44
CPA4-205ENST00000474254 TOPORSQ9NS56 1045 aaPredicted RBP17.83■□□□□ 0.44
CPA4-205ENST00000474254 SRPRBQ9Y5M8 271 aaKnown RBP17.83■□□□□ 0.44
CPA4-205ENST00000474254 PRR23AA6NEV1 266 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 H0YCG3 227 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 TADA2AO75478 443 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 TOM1L1O75674 476 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 RFPL2O75678 378 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 CFHP08603 1231 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 DHX8Q14562 1220 aaKnown RBP17.82■□□□□ 0.44
CPA4-205ENST00000474254 NOLC1Q14978 699 aaKnown RBP eCLIP17.82■□□□□ 0.44
CPA4-205ENST00000474254 GLRA4Q5JXX5 417 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 ZPBP2Q6X784 338 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 USP49Q70CQ1 688 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 ASCL5Q7RTU5 278 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 FRMD5Q7Z6J6 570 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 RIN2Q8WYP3 895 aaPredicted RBP17.82■□□□□ 0.44
CPA4-205ENST00000474254 LARP4BQ92615 738 aaKnown RBP17.82■□□□□ 0.44
CPA4-205ENST00000474254 NKD2Q969F2 451 aaPredicted RBP17.82■□□□□ 0.44
CPA4-205ENST00000474254 EPSTI1Q96J88 318 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 B3GALT6Q96L58 329 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 ZDHHC7Q9NXF8 308 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 EPS15L1Q9UBC2 864 aa17.82■□□□□ 0.44
CPA4-205ENST00000474254 TGM5O43548 720 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 NARSO43776 548 aaKnown RBP17.81■□□□□ 0.44
CPA4-205ENST00000474254 N4BP1O75113 896 aaKnown RBP17.81■□□□□ 0.44
CPA4-205ENST00000474254 C1RP00736 705 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 YARSP54577 528 aaKnown RBP17.81■□□□□ 0.44
CPA4-205ENST00000474254 CEBPZQ03701 1054 aaKnown RBP17.81■□□□□ 0.44
CPA4-205ENST00000474254 XKR4Q5GH76 650 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 SPECC1Q5M775 1068 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 GET4Q7L5D6 327 aaPredicted RBP17.81■□□□□ 0.44
CPA4-205ENST00000474254 CCDC105Q8IYK2 499 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 HASPINQ8TF76 798 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 RSAD2Q8WXG1 361 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 NXPE3Q969Y0 559 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 SNX27Q96L92 541 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 PARVGQ9HBI0 331 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 FNIP2Q9P278 1114 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 ANKFY1Q9P2R3 1169 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 WNT16Q9UBV4 365 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 STK17AQ9UEE5 414 aa17.81■□□□□ 0.44
CPA4-205ENST00000474254 CFAP54Q96N23 3096 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 TMEM189-UBE2V1I3L0A0 370 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 FAM13AO94988 1023 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 NPR3P17342 541 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 SCP2P22307 547 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 OSTNP61366 133 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 SLC39A14Q15043 492 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 ALKAL1Q6UXT8 129 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 HAUS6Q7Z4H7 955 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 DTWD2Q8NBA8 298 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 ZNF707Q96C28 371 aaPredicted RBP17.8■□□□□ 0.44
CPA4-205ENST00000474254 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
CPA4-205ENST00000474254 CLIC6Q96NY7 704 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 MYADMQ96S97 322 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 TCHPQ9BT92 498 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.8■□□□□ 0.44
CPA4-205ENST00000474254 MYO15AQ9UKN7 3530 aa17.8■□□□□ 0.44
CPA4-205ENST00000474254 SMIM28A0A1B0GU29 152 aa17.79■□□□□ 0.44
CPA4-205ENST00000474254 K7ENM7 598 aa17.79■□□□□ 0.44
CPA4-205ENST00000474254 PI15O43692 258 aa17.79■□□□□ 0.44
CPA4-205ENST00000474254 TBCAO75347 108 aaKnown RBP17.79■□□□□ 0.44
CPA4-205ENST00000474254 KRT18P05783 430 aaKnown RBP17.79■□□□□ 0.44
CPA4-205ENST00000474254 SRFP11831 508 aa17.79■□□□□ 0.44
CPA4-205ENST00000474254 HARSP12081 509 aaKnown RBP17.79■□□□□ 0.44
CPA4-205ENST00000474254 RPL17P18621 184 aaKnown RBP17.79■□□□□ 0.44
CPA4-205ENST00000474254 TXLNAP40222 546 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms