RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 IBSPP21815 317 aaPredicted RBP11.26□□□□□ -0.61
CASC3-204ENST00000474190 KCNJ6P48051 423 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 PPP3CAQ08209 521 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 LMBRD2Q68DH5 695 aaPredicted RBP11.26□□□□□ -0.61
CASC3-204ENST00000474190 LRSAM1Q6UWE0 723 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 TRIM59Q8IWR1 403 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 CMTR2Q8IYT2 770 aaKnown RBP11.26□□□□□ -0.61
CASC3-204ENST00000474190 C3orf58Q8NDZ4 430 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 CLP1Q92989 425 aaKnown RBP11.26□□□□□ -0.61
CASC3-204ENST00000474190 PGBD4Q96DM1 585 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 CEP63Q96MT8 703 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 RAD9AQ99638 391 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 CCDC94Q9BW85 323 aaPredicted RBP11.26□□□□□ -0.61
CASC3-204ENST00000474190 VN1R3Q9BXE9 311 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 SRRTQ9BXP5 876 aaKnown RBP11.26□□□□□ -0.61
CASC3-204ENST00000474190 TRIM6Q9C030 488 aaPredicted RBP11.26□□□□□ -0.61
CASC3-204ENST00000474190 ASB7Q9H672 318 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 GOLGA2P5Q9HBQ8 144 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 CBX8Q9HC52 389 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 RBAKQ9NYW8 714 aaPredicted RBP11.26□□□□□ -0.61
CASC3-204ENST00000474190 DNAJB4Q9UDY4 337 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 TUBGCP4Q9UGJ1 667 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 SIX4Q9UIU6 781 aa11.26□□□□□ -0.61
CASC3-204ENST00000474190 TRANK1O15050 2925 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 ANO9A1A5B4 782 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 BICDL2A1A5D9 508 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 LINC01553A4QN01 128 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 ZNF233A6NK53 670 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 VNN1O95497 513 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 LDHAP00338 332 aaKnown RBP11.25□□□□□ -0.61
CASC3-204ENST00000474190 C4BPAP04003 597 aaKnown RBP11.25□□□□□ -0.61
CASC3-204ENST00000474190 ITGB1P05556 798 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 TRIM49P0CI25 452 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 TRIM49CP0CI26 452 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 CCDC192P0DO97 292 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 PBX3P40426 434 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 ENPEPQ07075 957 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 STIM1Q13586 685 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 KYAT1Q16773 422 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 PAN2Q504Q3 1202 aaKnown RBP11.25□□□□□ -0.61
CASC3-204ENST00000474190 DPY19L2P1Q6NXN4 242 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 GLB1LQ6UWU2 654 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 CSGALNACT2Q8N6G5 542 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 C1orf127Q8N9H9 656 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 SLC35C1Q96A29 364 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 RPF1Q9H9Y2 349 aaKnown RBP11.25□□□□□ -0.61
CASC3-204ENST00000474190 KIAA1586Q9HCI6 787 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 UBN1Q9NPG3 1134 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 FANCLQ9NW38 375 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 MARCH5Q9NX47 278 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 NFE2L3Q9Y4A8 694 aa11.25□□□□□ -0.61
CASC3-204ENST00000474190 TTC28Q96AY4 2481 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.24□□□□□ -0.61
CASC3-204ENST00000474190 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.24□□□□□ -0.61
CASC3-204ENST00000474190 EPOPA6NHQ4 379 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 IKBKBO14920 756 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 CETN3O15182 167 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 SPTLC1O15269 473 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 CA3P07451 260 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 ATP1A3P13637 1013 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 LRPAP1P30533 357 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 PSMC2P35998 433 aaKnown RBP11.24□□□□□ -0.61
CASC3-204ENST00000474190 MATR3P43243 847 aaKnown RBP eCLIP11.24□□□□□ -0.61
CASC3-204ENST00000474190 SLC11A1P49279 550 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 ZNF165P49910 485 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 TAP1Q03518 808 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 CBWD6Q4V339 395 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 CBWD3Q5JTY5 395 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 MIIPQ5JXC2 388 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 CBWD5Q5RIA9 395 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 TDRD10Q5VZ19 366 aaKnown RBP11.24□□□□□ -0.61
CASC3-204ENST00000474190 CEP135Q66GS9 1140 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 LUZP1Q86V48 1076 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 FAM186BQ8IYM0 893 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 RNF168Q8IYW5 571 aaPredicted RBP11.24□□□□□ -0.61
CASC3-204ENST00000474190 AOPEPQ8N6M6 819 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 RABGGTAQ92696 567 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 CGRRF1Q99675 332 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 THAP9Q9H5L6 903 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 INPP5FQ9Y2H2 1132 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 DERAQ9Y315 318 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 C2CD2Q9Y426 696 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 INSL6Q9Y581 213 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 PCDHA11Q9Y5I1 949 aa11.24□□□□□ -0.61
CASC3-204ENST00000474190 LRRC10BA6NIK2 292 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 PIRO00625 290 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 AP5Z1O43299 807 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 HOXA2O43364 376 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 TLL1O43897 1013 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 IL18RAPO95256 599 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 CST3P01034 146 aaPredicted RBP11.23□□□□□ -0.61
CASC3-204ENST00000474190 GALTP07902 379 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 CYP3A5P20815 502 aa11.23□□□□□ -0.61
CASC3-204ENST00000474190 RPL13P26373 211 aaKnown RBP11.23□□□□□ -0.61
CASC3-204ENST00000474190 AARSP49588 968 aaKnown RBP eCLIP11.23□□□□□ -0.617e-10■■■■□ 22.7
CASC3-204ENST00000474190 VAMP7P51809 220 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms