RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 MSNP26038 577 aaKnown RBP11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 PON1P27169 355 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 PBX1P40424 430 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 CCL23P55773 120 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 YWHAEP62258 255 aaKnown RBP11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 PPP3CAQ08209 521 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 LRMPQ12912 555 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 MYO1EQ12965 1108 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 HS1BP3Q53T59 392 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 JADE1Q6IE81 842 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 TRIM65Q6PJ69 517 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 SV2AQ7L0J3 742 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 ENOSF1Q7L5Y1 443 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 VPS36Q86VN1 386 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 PPM1KQ8N3J5 372 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 TMEM199Q8N511 208 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 EHBP1Q8NDI1 1231 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 OR8K1Q8NGG5 319 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 URGCPQ8TCY9 931 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 SNX27Q96L92 541 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 HTATIP2Q9BUP3 242 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 NAA15Q9BXJ9 866 aaKnown RBP11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 DEF6Q9H4E7 631 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 AGO3Q9H9G7 860 aaKnown RBP11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 NLRC4Q9NPP4 1024 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 APEX2Q9UBZ4 518 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 ITGA11Q9UKX5 1188 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 CAPN11Q9UMQ6 739 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 UBQLN1Q9UMX0 589 aaKnown RBP11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 GIT1Q9Y2X7 761 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 HES2Q9Y543 173 aa11.08□□□□□ -0.64
PRPF38A-202ENST00000474048 ANK1P16157 1881 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 HOXA2O43364 376 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 FAM189A1O60320 539 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 HLA-DRAP01903 254 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 GYPCP04921 128 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 ACTN1P12814 892 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 UCHL3P15374 230 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 SLC9A1P19634 815 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 TBXAS1P24557 533 aaPredicted RBP11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 AKAP5P24588 427 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 KLK7P49862 253 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 ADKP55263 362 aaKnown RBP11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 TNNC1P63316 161 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 FAAP100Q0VG06 881 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 NCOA4Q13772 614 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 SGSM1Q2NKQ1 1148 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 ZNF699Q32M78 642 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 ZACNQ401N2 412 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 EPC2Q52LR7 807 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 TDRD12Q587J7 1177 aaKnown RBP11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 SFMBT2Q5VUG0 894 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 GLB1LQ6UWU2 654 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 SLC24A5Q71RS6 500 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 RRAGAQ7L523 313 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 TRAPPC11Q7Z392 1133 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 TMEM192Q8IY95 271 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 TAF4BQ92750 862 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 ZNF560Q96MR9 790 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 PANX2Q96RD6 677 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 RSAD1Q9HA92 442 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 ABHD10Q9NUJ1 306 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 SIK3Q9Y2K2 1263 aa11.07□□□□□ -0.64
PRPF38A-202ENST00000474048 A0A0U1RQF3 1178 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 TTC26A0AVF1 554 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 ITGB3P05106 788 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 THP07101 528 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 NFICP08651 508 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 ATICP31939 592 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 CYP2C18P33260 490 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 MLH1P40692 756 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 USP8P40818 1118 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 STAT1P42224 750 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 NOP14P78316 857 aaKnown RBP11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 CLDN10P78369 228 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 RBP5P82980 135 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 RNASELQ05823 741 aaKnown RBP11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 IKBKEQ14164 716 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 ASIC2Q16515 512 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 ARHGAP44Q17R89 818 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 LRRC26Q2I0M4 334 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 SLC10A6Q3KNW5 377 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 ZNF667Q5HYK9 610 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 UBXN11Q5T124 520 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 KLHDC7AQ5VTJ3 777 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 TDRD10Q5VZ19 366 aaKnown RBP11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 CYP26C1Q6V0L0 522 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 DEFB128Q7Z7B8 93 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 LRRC8AQ8IWT6 810 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 RPUSD2Q8IZ73 545 aaKnown RBP11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 PLEKHO2Q8TD55 490 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 TAS1R2Q8TE23 839 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 SCLYQ96I15 445 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 FAM193BQ96PV7 902 aaPredicted RBP11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 BAG1Q99933 345 aaPredicted RBP11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 TRAIPQ9BWF2 469 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 UBE2TQ9NPD8 197 aaPredicted RBP11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 LUC7LQ9NQ29 371 aaKnown RBP11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 RGS18Q9NS28 235 aa11.06□□□□□ -0.64
PRPF38A-202ENST00000474048 DPP3Q9NY33 737 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms