RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 LLGL2Q6P1M3 1020 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 CD300LGQ6UXG3 332 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 C3orf58Q8NDZ4 430 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 C18orf25Q96B23 403 aaPredicted RBP20.66■□□□□ 0.9
PTCD3-210ENST00000473829 NECAB3Q96P71 396 aaPredicted RBP20.66■□□□□ 0.9
PTCD3-210ENST00000473829 MSTO1Q9BUK6 570 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 STYXL1Q9Y6J8 313 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 PLXNA3P51805 1871 aa20.66■□□□□ 0.9
PTCD3-210ENST00000473829 TTC26A0AVF1 554 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 C2CD2LO14523 706 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 PRPF6O94906 941 aaKnown RBP20.65■□□□□ 0.9
PTCD3-210ENST00000473829 IL9P15248 144 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 ADSSP30520 456 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 SPAG1Q07617 926 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 EHHADHQ08426 723 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 CEP57L1Q8IYX8 460 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 ADAMTS19Q8TE59 1207 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 ACCSQ96QU6 501 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 PYM1Q9BRP8 204 aaKnown RBP20.65■□□□□ 0.9
PTCD3-210ENST00000473829 STK39Q9UEW8 545 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 HCFC2Q9Y5Z7 792 aa20.65■□□□□ 0.9
PTCD3-210ENST00000473829 A0A1W2PQ27 194 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 A0A1W2PQ64 194 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 A0A1W2PQD8 194 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 TADA2AO75478 443 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 URODP06132 367 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 CNPP09543 421 aaKnown RBP20.64■□□□□ 0.89
PTCD3-210ENST00000473829 GLUD2P49448 558 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 ALCAMQ13740 583 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 BMS1Q14692 1282 aaKnown RBP20.64■□□□□ 0.89
PTCD3-210ENST00000473829 UPP1Q16831 310 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 KIAA0319Q5VV43 1072 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 PTCRAQ6ISU1 281 aaPredicted RBP20.64■□□□□ 0.89
PTCD3-210ENST00000473829 UNC13DQ70J99 1090 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 FSIP1Q8NA03 581 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 PAGE5Q96GU1 130 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 MRPL17Q9NRX2 175 aaKnown RBP20.64■□□□□ 0.89
PTCD3-210ENST00000473829 CHST7Q9NS84 486 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 TUBGCP4Q9UGJ1 667 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 CPSF3Q9UKF6 684 aaKnown RBP20.64■□□□□ 0.89
PTCD3-210ENST00000473829 PCDHB13Q9Y5F0 798 aa20.64■□□□□ 0.89
PTCD3-210ENST00000473829 SF3B1O75533 1304 aaKnown RBP eCLIP20.63■□□□□ 0.894e-7■■■■■ 86.2
PTCD3-210ENST00000473829 GRXCR2A6NFK2 248 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 LACTBL1A8MY62 500 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 TMEM189-UBE2V1I3L0A0 370 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 HOXD13P35453 343 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 ACOT2P49753 483 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 DSG1Q02413 1049 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 RTP2Q5QGT7 225 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 FAM26FQ5R3K3 315 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 TMEM184AQ6ZMB5 413 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 EPM2AIP1Q7L775 607 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-210ENST00000473829 ZSWIM2Q8NEG5 633 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 UROC1Q96N76 676 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 KLHL5Q96PQ7 755 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 PLEKHA5Q9HAU0 1116 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 CD207Q9UJ71 328 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 AGO2Q9UKV8 859 aaKnown RBP20.63■□□□□ 0.89
PTCD3-210ENST00000473829 EXOC7Q9UPT5 735 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 TTC28Q96AY4 2481 aa20.63■□□□□ 0.89
PTCD3-210ENST00000473829 FSD2A1L4K1 749 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 MBTPS2O43462 519 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 KLRC4O43908 158 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 ADRB2P07550 413 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 EPCAMP16422 314 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 SYKP43405 635 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 PPP2R3AQ06190 1150 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 KYAT1Q16773 422 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 SLFN12LQ6IEE8 588 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 CRELD2Q6UXH1 353 aaPredicted RBP20.62■□□□□ 0.89
PTCD3-210ENST00000473829 SMRP1Q8NCR6 262 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 SLC22A17Q8WUG5 538 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 POMGNT1Q8WZA1 660 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 RPF1Q9H9Y2 349 aaKnown RBP20.62■□□□□ 0.89
PTCD3-210ENST00000473829 SLC38A7Q9NVC3 462 aa20.62■□□□□ 0.89
PTCD3-210ENST00000473829 I3L4J1 428 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 DLL1O00548 723 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 PODXLO00592 558 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 TEX28O15482 410 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 B3GAT3O94766 335 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 PRR29P0C7W0 189 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 ZBTB6Q15916 424 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 USP41Q3LFD5 358 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 FAM171A1Q5VUB5 890 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 ANKRD54Q6NXT1 300 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 SYCE2Q6PIF2 218 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 DCLRE1AQ6PJP8 1040 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 PRSS55Q6UWB4 352 aaPredicted RBP20.61■□□□□ 0.89
PTCD3-210ENST00000473829 SYCP3Q8IZU3 236 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 RIN2Q8WYP3 895 aaPredicted RBP20.61■□□□□ 0.89
PTCD3-210ENST00000473829 KIF12Q96FN5 646 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 UHRF1Q96T88 793 aaPredicted RBP20.61■□□□□ 0.89
PTCD3-210ENST00000473829 CBWD1Q9BRT8 395 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 RXFP1Q9HBX9 757 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 USP25Q9UHP3 1055 aa20.61■□□□□ 0.89
PTCD3-210ENST00000473829 CUL9Q8IWT3 2517 aa20.6■□□□□ 0.89
PTCD3-210ENST00000473829 PVALEFA0A1B0GWK0 134 aa20.6■□□□□ 0.89
PTCD3-210ENST00000473829 BRCC3P46736 316 aa20.6■□□□□ 0.89
PTCD3-210ENST00000473829 CLCN4P51793 760 aa20.6■□□□□ 0.89
PTCD3-210ENST00000473829 GUCY2FP51841 1108 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms