RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.9□□□□□ -1.46
CNOT4-209ENST00000473470 LENG9Q96B70 501 aa5.9□□□□□ -1.46
CNOT4-209ENST00000473470 CEP95Q96GE4 821 aa5.9□□□□□ -1.46
CNOT4-209ENST00000473470 CEP89Q96ST8 783 aa5.9□□□□□ -1.46
CNOT4-209ENST00000473470 TRIM8Q9BZR9 551 aa5.9□□□□□ -1.46
CNOT4-209ENST00000473470 SLC13A1Q9BZW2 595 aa5.9□□□□□ -1.46
CNOT4-209ENST00000473470 REXO4Q9GZR2 422 aaKnown RBP5.9□□□□□ -1.46
CNOT4-209ENST00000473470 PCDHGA2Q9Y5H1 932 aa5.9□□□□□ -1.46
CNOT4-209ENST00000473470 ZMYM3Q14202 1370 aa5.9□□□□□ -1.47
CNOT4-209ENST00000473470 KLHL33A6NCF5 533 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 CXorf49A8MYA2 514 aaPredicted RBP5.89□□□□□ -1.47
CNOT4-209ENST00000473470 NDUFS2O75306 463 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 SCAF4O95104 1147 aaKnown RBP5.89□□□□□ -1.47
CNOT4-209ENST00000473470 RAP2AP10114 183 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 ATP5JP18859 108 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 FAM50AQ14320 339 aaKnown RBP5.89□□□□□ -1.47
CNOT4-209ENST00000473470 ACAP2Q15057 778 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 MFSD14BQ5SR56 506 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 ATXN7L2Q5T6C5 722 aaPredicted RBP5.89□□□□□ -1.47
CNOT4-209ENST00000473470 ARMC6Q6NXE6 501 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 GDF7Q7Z4P5 450 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 PNMA8AQ86V59 439 aaPredicted RBP5.89□□□□□ -1.47
CNOT4-209ENST00000473470 XYLT1Q86Y38 959 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 CPT1CQ8TCG5 803 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 HAS1Q92839 578 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 HDAC10Q969S8 669 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 NRDE2Q9H7Z3 1164 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 WASHC2CQ9Y4E1 1318 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 UHRF1BP1Q6BDS2 1440 aa5.89□□□□□ -1.47
CNOT4-209ENST00000473470 GABRDO14764 452 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 SGTAO43765 313 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 NARSO43776 548 aaKnown RBP5.88□□□□□ -1.47
CNOT4-209ENST00000473470 TOM1O60784 492 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 FAM20BO75063 409 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 KATNA1O75449 491 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 FSHBP01225 129 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 RPLP2P05387 115 aaKnown RBP5.88□□□□□ -1.47
CNOT4-209ENST00000473470 APOBEC3AP31941 199 aaPredicted RBP5.88□□□□□ -1.47
CNOT4-209ENST00000473470 DGCR2P98153 550 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 ODR4Q5SWX8 454 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 OTUD7BQ6GQQ9 843 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 PPP4R3AQ6IN85 833 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 SLC16A11Q8NCK7 471 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 FAXDC2Q96IV6 333 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 ASPSCR1Q9BZE9 553 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 POGKQ9P215 609 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 AJAP1Q9UKB5 411 aaPredicted RBP5.88□□□□□ -1.47
CNOT4-209ENST00000473470 ABCA10Q8WWZ4 1543 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 FRMPD1Q5SYB0 1578 aa5.88□□□□□ -1.47
CNOT4-209ENST00000473470 RNASET2O00584 256 aaKnown RBP5.87□□□□□ -1.47
CNOT4-209ENST00000473470 AKAP8O43823 692 aaKnown RBP5.87□□□□□ -1.47
CNOT4-209ENST00000473470 DTNBO60941 627 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 ITGB1P05556 798 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 HLA-DOAP06340 250 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 GSPT1P15170 499 aaKnown RBP5.87□□□□□ -1.47
CNOT4-209ENST00000473470 ALDH1A3P47895 512 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 SLC25A3Q00325 362 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 AFMIDQ63HM1 303 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 SEM1Q6ZVN7 128 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 RNF169Q8NCN4 708 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 REPS2Q8NFH8 660 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 JADE3Q92613 823 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 FUBP3Q96I24 572 aaKnown RBP eCLIP5.87□□□□□ -1.47
CNOT4-209ENST00000473470 TEKT5Q96M29 485 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 PRRX2Q99811 253 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 PCED1AQ9H1Q7 454 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 TRPM5Q9NZQ8 1165 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 FAM30AQ9NZY2 134 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 FZD1Q9UP38 647 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 CHST2Q9Y4C5 530 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 HS3ST3A1Q9Y663 406 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 ATRNL1Q5VV63 1379 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 ALKQ9UM73 1620 aa5.87□□□□□ -1.47
CNOT4-209ENST00000473470 MAGI3Q5TCQ9 1506 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 WDR7Q9Y4E6 1490 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 FZD9O00144 591 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 PLSCR1O15162 318 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 ZSCAN20P17040 1043 aaPredicted RBP5.86□□□□□ -1.47
CNOT4-209ENST00000473470 LAG3P18627 525 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 ADKP55263 362 aaKnown RBP5.86□□□□□ -1.47
CNOT4-209ENST00000473470 CDC42EP1Q00587 391 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 NHLH2Q02577 135 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 MTM1Q13496 603 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 SEPT2Q15019 361 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 LY6G5CQ5SRR4 150 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 EFCAB2Q5VUJ9 269 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 ANKS6Q68DC2 871 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 KCNV1Q6PIU1 500 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 SMAD5Q99717 465 aaKnown RBP5.86□□□□□ -1.47
CNOT4-209ENST00000473470 MRI1Q9BV20 369 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 SCAND2PQ9GZW5 306 aaPredicted RBP5.86□□□□□ -1.47
CNOT4-209ENST00000473470 MMRN2Q9H8L6 949 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 TDP1Q9NUW8 608 aa5.86□□□□□ -1.47
CNOT4-209ENST00000473470 THRAP3Q9Y2W1 955 aaKnown RBP5.86□□□□□ -1.47
CNOT4-209ENST00000473470 KIAA0556O60303 1618 aa5.85□□□□□ -1.47
CNOT4-209ENST00000473470 TTC37Q6PGP7 1564 aa5.85□□□□□ -1.47
CNOT4-209ENST00000473470 UACAQ9BZF9 1416 aa5.85□□□□□ -1.47
CNOT4-209ENST00000473470 ALDH1L1O75891 902 aa5.85□□□□□ -1.47
CNOT4-209ENST00000473470 ABHD16AO95870 558 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms