RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 SLC8B1Q6J4K2 584 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 C1orf186Q6ZWK4 172 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 ZNF461Q8TAF7 563 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 TSPAN18Q96SJ8 248 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 OXCT2Q9BYC2 517 aaPredicted RBP14.86□□□□□ -0.03
CHD3-209ENST00000473376 OSBPL6Q9BZF3 934 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 ARHGEF3Q9NR81 526 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.86□□□□□ -0.03
CHD3-209ENST00000473376 FAM86C1Q9NVL1 165 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 GDE1Q9NZC3 331 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 GDAQ9Y2T3 454 aa14.86□□□□□ -0.03
CHD3-209ENST00000473376 ARHGEF37A1IGU5 675 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 PI15O43692 258 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 NARSO43776 548 aaKnown RBP14.85□□□□□ -0.03
CHD3-209ENST00000473376 ABLIM3O94929 683 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 OR1D2P34982 312 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 CLCNKBP51801 687 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 PEX3P56589 373 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 PFKPQ01813 784 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 ANGPT1Q15389 498 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 AXDND1Q5T1B0 1012 aaPredicted RBP14.85□□□□□ -0.03
CHD3-209ENST00000473376 RINT1Q6NUQ1 792 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 CD300LGQ6UXG3 332 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 GET4Q7L5D6 327 aaPredicted RBP14.85□□□□□ -0.03
CHD3-209ENST00000473376 GRASPQ7Z6J2 395 aaPredicted RBP14.85□□□□□ -0.03
CHD3-209ENST00000473376 DAW1Q8N136 415 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 RSAD2Q8WXG1 361 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 RABGGTAQ92696 567 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 FGF13Q92913 245 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 PLEKHA5Q9HAU0 1116 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 KMT5AQ9NQR1 393 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 CNTN3Q9P232 1028 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 SIT1Q9Y3P8 196 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 PCDHB6Q9Y5E3 794 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 NUMBLQ9Y6R0 609 aa14.85□□□□□ -0.03
CHD3-209ENST00000473376 CCDC169A6NNP5 214 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 H7C4K7 107 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 ABLIM1O14639 778 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 TBC1D4O60343 1298 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 HIP1RO75146 1068 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 TOM1L1O75674 476 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 CFHP08603 1231 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 MAGEA9P43362 315 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 SMTNP53814 917 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 PRKCQQ04759 706 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 MAPK7Q13164 816 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 MRPL58Q14197 206 aaKnown RBP14.84□□□□□ -0.03
CHD3-209ENST00000473376 RABEP1Q15276 862 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 KYAT1Q16773 422 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 ZNF568Q3ZCX4 644 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 TPGS2Q68CL5 300 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 MPZL3Q6UWV2 235 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 ZPBP2Q6X784 338 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 GLYCTKQ8IVS8 523 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 SLC7A14Q8TBB6 771 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 GPR152Q8TDT2 470 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 HASPINQ8TF76 798 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 ACAP3Q96P50 834 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 DDX23Q9BUQ8 820 aaKnown RBP14.84□□□□□ -0.03
CHD3-209ENST00000473376 KIFC3Q9BVG8 833 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 CDT1Q9H211 546 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 TBC1D17Q9HA65 648 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 DLGAP2Q9P1A6 1054 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 CACNG4Q9UBN1 327 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 DOCK8Q8NF50 2099 aa14.84□□□□□ -0.03
CHD3-209ENST00000473376 PLS3P13797 630 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 ATF2P15336 505 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 PAX3P23760 479 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 ABCD1P33897 745 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 ATP2C1P98194 919 aaPredicted RBP14.83□□□□□ -0.04
CHD3-209ENST00000473376 STRN3Q13033 797 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 ASCL5Q7RTU5 278 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 TAS1R3Q7RTX0 852 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 TCEAL8Q8IYN2 117 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 SYT2Q8N9I0 419 aaPredicted RBP14.83□□□□□ -0.04
CHD3-209ENST00000473376 SNX27Q96L92 541 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 AK8Q96MA6 479 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 NELL2Q99435 816 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 MMTAG2Q9BU76 263 aaKnown RBP14.83□□□□□ -0.04
CHD3-209ENST00000473376 CXCL16Q9H2A7 254 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 CDY1Q9Y6F8 540 aa14.83□□□□□ -0.04
CHD3-209ENST00000473376 PTPRZ1P23471 2315 aaPredicted RBP14.83□□□□□ -0.04
CHD3-209ENST00000473376 E9PMD0 336 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 ADAM12O43184 909 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 ECI2O75521 394 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 LIG1P18858 919 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 RFX1P22670 979 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 IL17AQ16552 155 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 PABPC1LQ4VXU2 614 aaKnown RBP14.82□□□□□ -0.04
CHD3-209ENST00000473376 ZC3H14Q6PJT7 736 aaKnown RBP14.82□□□□□ -0.04
CHD3-209ENST00000473376 LEMD2Q8NC56 503 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 TMEM161BQ8NDZ6 487 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 APPL2Q8NEU8 664 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 PJA1Q8NG27 643 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 FGF14Q92915 247 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 SUSD3Q96L08 255 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 TCHPQ9BT92 498 aa14.82□□□□□ -0.04
CHD3-209ENST00000473376 TARS2Q9BW92 718 aaKnown RBP14.82□□□□□ -0.04
CHD3-209ENST00000473376 LARSQ9P2J5 1176 aaKnown RBP14.82□□□□□ -0.04
CHD3-209ENST00000473376 USP20Q9Y2K6 914 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms