RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	PRKCQ	Q04759	706 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	TFDP1	Q14186	410 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	GRM2	Q14416	872 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	FAM187B	Q17R55	369 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	PABPC1L	Q4VXU2	614 aa	Known RBP	10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	HS6ST3	Q8IZP7	471 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	NECAB1	Q8N987	351 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	RSPRY1	Q96DX4	576 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	ZMAT2	Q96NC0	199 aa	Known RBP	10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	OSBPL6	Q9BZF3	934 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	TTC12	Q9H892	705 aa	Predicted RBP	10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	ZSCAN32	Q9NX65	697 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	DPP7	Q9UHL4	492 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	GDA	Q9Y2T3	454 aa		10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.64	□□□□□ -0.71
MCF2L-223	ENST00000473345	WDR27	A2RRH5	827 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	BTBD18	B2RXH4	712 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	PFKFB2	O60825	505 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	NR1I2	O75469	434 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	VNN2	O95498	520 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	TH	P07101	528 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	POU2F2	P09086	479 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	GJA1	P17302	382 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	TXK	P42681	527 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	SRSF5	Q13243	272 aa	Known RBP	10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	FAM78A	Q5JUQ0	283 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	LIN9	Q5TKA1	542 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	CATSPER3	Q86XQ3	398 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	EXOC8	Q8IYI6	725 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	SHD	Q96IW2	340 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	BCO2	Q9BYV7	579 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	PDRG1	Q9NUG6	133 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	NCDN	Q9UBB6	729 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	NDRG2	Q9UN36	371 aa	Known RBP	10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	PCDHA12	Q9UN75	941 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	PCDHGA2	Q9Y5H1	932 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	CYP46A1	Q9Y6A2	500 aa		10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	10.63	□□□□□ -0.71
MCF2L-223	ENST00000473345	TMEM189-UBE2V1	I3L0A0	370 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	ARNTL	O00327	626 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	SPTLC1	O15269	473 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	JAK2	O60674	1132 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	ECI2	O75521	394 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	ABLIM3	O94929	683 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	LIG1	P18858	919 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	SATB1	Q01826	763 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	ROR1	Q01973	937 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	CALCRL	Q16602	461 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	UPP1	Q16831	310 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	ZBTB41	Q5SVQ8	909 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	ELMSAN1	Q6PJG2	1045 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	VIT	Q6UXI7	678 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	MTSS1L	Q765P7	747 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	TAS1R3	Q7RTX0	852 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	SLFN12	Q8IYM2	578 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	FAM177A1	Q8N128	213 aa	Predicted RBP	10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	LRRC3B	Q96PB8	259 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	TM6SF1	Q9BZW5	370 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	PRMT7	Q9NVM4	692 aa	Predicted RBP	10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	ORC3	Q9UBD5	711 aa	Predicted RBP	10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	RALY	Q9UKM9	306 aa	Known RBP	10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	KCNH3	Q9ULD8	1083 aa		10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	MRPS23	Q9Y3D9	190 aa	Known RBP	10.62	□□□□□ -0.71
MCF2L-223	ENST00000473345	ARHGEF37	A1IGU5	675 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	ABLIM1	O14639	778 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	HR	O43593	1189 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	GDF9	O60383	454 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	XYLB	O75191	536 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	B3GAT3	O94766	335 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	PRKCB	P05771	671 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	VIPR2	P41587	438 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	RPS9	P46781	194 aa	Known RBP	10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	CREM	Q03060	361 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	SPEM2	Q0P670	501 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	ME3	Q16798	604 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	ALKAL1	Q6UXT8	129 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	GPIHBP1	Q8IV16	184 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	MAP4K3	Q8IVH8	894 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	ATRIP	Q8WXE1	791 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	C18orf25	Q96B23	403 aa	Predicted RBP	10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	CHRD	Q9H2X0	955 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	CRISPLD1	Q9H336	500 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	AVEN	Q9NQS1	362 aa	Predicted RBP	10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	RBM12	Q9NTZ6	932 aa	Known RBP	10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	CEP72	Q9P209	647 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	BACE2	Q9Y5Z0	518 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	EPG5	Q9HCE0	2579 aa		10.61	□□□□□ -0.71
MCF2L-223	ENST00000473345	SPTBN2	O15020	2390 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	SMIM28	A0A1B0GU29	152 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	ACKR2	O00590	384 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	N4BP3	O15049	544 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	MARCH6	O60337	910 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	CHRNB1	P11230	501 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	ATP2B1	P20020	1258 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	KRT2	P35908	639 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	SOX9	P48436	509 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	ADCY1	Q08828	1119 aa		10.6	□□□□□ -0.71
MCF2L-223	ENST00000473345	NCBP1	Q09161	790 aa	Known RBP	10.6	□□□□□ -0.71

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