RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 IDEP14735 1019 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 KCNE1P15382 129 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 NMT1P30419 496 aaKnown RBP17.02■□□□□ 0.32
MRPL55-226ENST00000473066 PPP2R3AQ06190 1150 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 PSMD5Q16401 504 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 TMEM31Q5JXX7 168 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 DCLRE1AQ6PJP8 1040 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 TMC5Q6UXY8 1006 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-226ENST00000473066 SFR1Q86XK3 245 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 RNF135Q8IUD6 432 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 PDILTQ8N807 584 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 KCNG4Q8TDN1 519 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 PIK3R5Q8WYR1 880 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 DDX12PQ92771 950 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 KHSRPQ92945 711 aaKnown RBP eCLIP17.02■□□□□ 0.32
MRPL55-226ENST00000473066 HVCN1Q96D96 273 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 MSTO1Q9BUK6 570 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 LRRC27Q9C0I9 530 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 GOLGA2P5Q9HBQ8 144 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 CNTN3Q9P232 1028 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 NUB1Q9Y5A7 615 aa17.02■□□□□ 0.32
MRPL55-226ENST00000473066 TCHHQ07283 1943 aa17.02■□□□□ 0.31
MRPL55-226ENST00000473066 OGTO15294 1046 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 XPOTO43592 962 aaKnown RBP17.01■□□□□ 0.31
MRPL55-226ENST00000473066 CXCL8P10145 99 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 SP100P23497 879 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-226ENST00000473066 CLCNKBP51801 687 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 SEZ6Q53EL9 994 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 XKR4Q5GH76 650 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 RTP2Q5QGT7 225 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 ATL3Q6DD88 541 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 PRSS55Q6UWB4 352 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-226ENST00000473066 MAP4K3Q8IVH8 894 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 PANK2Q9BZ23 570 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 POMKQ9H5K3 350 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 MRPL44Q9H9J2 332 aaKnown RBP17.01■□□□□ 0.31
MRPL55-226ENST00000473066 CFAP45Q9UL16 551 aa17.01■□□□□ 0.31
MRPL55-226ENST00000473066 MYMKA6NI61 221 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 PODXLO00592 558 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 WEE2P0C1S8 567 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 RPL17P18621 184 aaKnown RBP17■□□□□ 0.31
MRPL55-226ENST00000473066 ME1P48163 572 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 GTF2BQ00403 316 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 UPP1Q16831 310 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 ALKAL1Q6UXT8 129 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 CCDC149Q6ZUS6 474 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 PALB2Q86YC2 1186 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 TDRD5Q8NAT2 981 aaKnown RBP17■□□□□ 0.31
MRPL55-226ENST00000473066 HDAC7Q8WUI4 952 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 CUEDC2Q9H467 287 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 ST6GALNAC4Q9H4F1 302 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 PLEKHA4Q9H4M7 779 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 RPF1Q9H9Y2 349 aaKnown RBP17■□□□□ 0.31
MRPL55-226ENST00000473066 PLEKHA5Q9HAU0 1116 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 MUTYHQ9UIF7 546 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 CDH22Q9UJ99 828 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 EXOC7Q9UPT5 735 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 MYO10Q9HD67 2058 aa17■□□□□ 0.31
MRPL55-226ENST00000473066 C1RP00736 705 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 RPL9P32969 192 aaKnown RBP16.99■□□□□ 0.31
MRPL55-226ENST00000473066 SOX4Q06945 474 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-226ENST00000473066 ALCAMQ13740 583 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 SLC10A6Q3KNW5 377 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 LIN9Q5TKA1 542 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 SLFN12LQ6IEE8 588 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 C15orf39Q6ZRI6 1047 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 GPR149Q86SP6 731 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 CCDC65Q8IXS2 484 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 KIF12Q96FN5 646 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 ZMAT2Q96NC0 199 aaKnown RBP16.99■□□□□ 0.31
MRPL55-226ENST00000473066 TNMDQ9H2S6 317 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 FAM13BQ9NYF5 915 aa16.99■□□□□ 0.31
MRPL55-226ENST00000473066 A0A087X0B3 334 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 FAM86C2PA6NEL3 165 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 GCNT3O95395 438 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 FGFR3P22607 806 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 MCM4P33991 863 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 AMPD3Q01432 767 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 ZC2HC1CQ53FD0 456 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-226ENST00000473066 HERC4Q5GLZ8 1057 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-226ENST00000473066 ADALQ6DHV7 355 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 CYP26C1Q6V0L0 522 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 ANKS3Q6ZW76 656 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 STXBP4Q6ZWJ1 553 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 IQUBQ8NA54 791 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 KREMEN2Q8NCW0 462 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 CMASQ8NFW8 434 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-226ENST00000473066 C18orf25Q96B23 403 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-226ENST00000473066 DHX58Q96C10 678 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 ACSF2Q96CM8 615 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-226ENST00000473066 DNAJC19Q96DA6 116 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 FAM212AQ96EL1 285 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 ACCSQ96QU6 501 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 FIZ1Q96SL8 496 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 PIDD1Q9HB75 910 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 PANK4Q9NVE7 773 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 TBC1D7Q9P0N9 293 aa16.98■□□□□ 0.31
MRPL55-226ENST00000473066 UBQLN1Q9UMX0 589 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms