RNA–Protein interactions for RNA: ENST00000471935.1

TRBV11-2-201, Transcript of T cell receptor beta variable 11-2, humanhuman

TSL 1 (best) BASIC

Gene TRBV11-2, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-2-201ENST00000471935 ZNF131P52739 623 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 DHX8Q14562 1220 aaKnown RBP13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 SLC39A4Q6P5W5 647 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 CCDC149Q6ZUS6 474 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 GPBP1Q86WP2 473 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 FBXL6Q8N531 539 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 KCTD17Q8N5Z5 321 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 PRSS33Q8NF86 280 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 HDAC7Q8WUI4 952 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 KCNN1Q92952 543 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 AK8Q96MA6 479 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 IKZF4Q9H2S9 585 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 CNTN3Q9P232 1028 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 FBXO2Q9UK22 296 aaPredicted RBP13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 FBXW11Q9UKB1 542 aa13.77□□□□□ -0.21
TRBV11-2-201ENST00000471935 CLUHO75153 1309 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 ZFHX2Q9C0A1 2572 aaPredicted RBP13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 TOM1L1O75674 476 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 ZMYND10O75800 440 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 C1RP00736 705 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 MARCKSP29966 332 aaPredicted RBP13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 LONP1P36776 959 aaKnown RBP13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 UBA7P41226 1012 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 NTHL1P78549 312 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 MCL1Q07820 350 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 ZBTB41Q5SVQ8 909 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 DCLRE1AQ6PJP8 1040 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 HAUS6Q7Z4H7 955 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 RSAD2Q8WXG1 361 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 RAD54LQ92698 747 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 CDK5RAP3Q96JB5 506 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 MFSD14AQ96MC6 490 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 CLIC6Q96NY7 704 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 CCDC94Q9BW85 323 aaPredicted RBP13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 PLEKHA4Q9H4M7 779 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 KCND2Q9NZV8 630 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 ANKFY1Q9P2R3 1169 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 MTRRQ9UBK8 725 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 MTMR6Q9Y217 621 aa13.76□□□□□ -0.21
TRBV11-2-201ENST00000471935 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 SLC26A4O43511 780 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 TBC1D4O60343 1298 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 CXCL8P10145 99 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 TNFSF9P41273 254 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 NHLH1Q02575 133 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 SPAG1Q07617 926 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 MTMR3Q13615 1198 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 NOLC1Q14978 699 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 POTEHQ6S545 545 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 ZPBP2Q6X784 338 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 OTOP3Q7RTS5 596 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 PLCD3Q8N3E9 789 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 ST13P5Q8NFI4 369 aaPredicted RBP13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 ACAP3Q96P50 834 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 PHOX2BQ99453 314 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 TCHPQ9BT92 498 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 PRKD2Q9BZL6 878 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 CCSER1Q9C0I3 900 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 TUBGCP4Q9UGJ1 667 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 ODF2LQ9ULJ1 636 aa13.75□□□□□ -0.21
TRBV11-2-201ENST00000471935 SCN1AP35498 2009 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 FRYLO94915 3013 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 A0A087X0B3 334 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 TTC26A0AVF1 554 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 TISP43B9A030 160 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 PODXLO00592 558 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 NARSO43776 548 aaKnown RBP13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 BMP15O95972 392 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 PIGRP01833 764 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 NMT1P30419 496 aaKnown RBP13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 OR1D2P34982 312 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 YARSP54577 528 aaKnown RBP13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 TCF15Q12870 199 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 RAB33AQ14088 237 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 ZBTB6Q15916 424 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 CALML4Q96GE6 196 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 INTS4Q96HW7 963 aaKnown RBP13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 UROC1Q96N76 676 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 USP28Q96RU2 1077 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 TOPORSQ9NS56 1045 aaPredicted RBP13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 TBX20Q9UMR3 447 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 SRPRBQ9Y5M8 271 aaKnown RBP13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 COL4A3Q01955 1670 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 CFAP54Q96N23 3096 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 TSC2P49815 1807 aa13.74□□□□□ -0.21
TRBV11-2-201ENST00000471935 ANKRD63C9JTQ0 380 aa13.73□□□□□ -0.21
TRBV11-2-201ENST00000471935 AVPR2P30518 371 aa13.73□□□□□ -0.21
TRBV11-2-201ENST00000471935 GUCY2FP51841 1108 aa13.73□□□□□ -0.21
TRBV11-2-201ENST00000471935 SMTNP53814 917 aa13.73□□□□□ -0.21
TRBV11-2-201ENST00000471935 CREMQ03060 361 aa13.73□□□□□ -0.21
TRBV11-2-201ENST00000471935 CEBPZQ03701 1054 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms