RNA–Protein interactions for RNA: ENST00000471470.1

CDC45-208, Transcript of cell division cycle 45, human

TSL 5

Gene CDC45, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC45-208	ENST00000471470	SLC38A7	Q9NVC3	462 aa		13.73	□□□□□ -0.21
CDC45-208	ENST00000471470	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.73	□□□□□ -0.21
CDC45-208	ENST00000471470	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	3e-6	■■■■■ 38.5
CDC45-208	ENST00000471470	RALGAPA2	Q2PPJ7	1873 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	PMM2	O15305	246 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	UPP2	O95045	317 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	GJB5	O95377	273 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	TH	P07101	528 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	TPM2	P07951	284 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	NFIC	P08651	508 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	DLAT	P10515	647 aa	Known RBP	13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	ATP2A2	P16615	1042 aa	Known RBP	13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	TNNI1	P19237	187 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	CYP3A5	P20815	502 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	SCNN1G	P51170	649 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	DLG4	P78352	724 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	KRT31	Q15323	416 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	DUOXA2	Q1HG44	320 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	HSP90AA4P	Q58FG1	418 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	C9orf50	Q5SZB4	431 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	C1orf220	Q5T0J3	134 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	TCERG1L	Q5VWI1	586 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	HERC6	Q8IVU3	1022 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	EFCAB13	Q8IY85	973 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	ZNF689	Q96CS4	500 aa	Predicted RBP	13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	KIF12	Q96FN5	646 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	RNPC3	Q96LT9	517 aa	Known RBP	13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	ZMAT2	Q96NC0	199 aa	Known RBP	13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	CASD1	Q96PB1	797 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	RC3H2	Q9HBD1	1191 aa	Known RBP	13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	INTS13	Q9NVM9	706 aa		13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	UBQLN1	Q9UMX0	589 aa	Known RBP	13.72	□□□□□ -0.21
CDC45-208	ENST00000471470	PTPRJ	Q12913	1337 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	P4HA2	O15460	535 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	N4BP1	O75113	896 aa	Known RBP	13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	TNNC2	P02585	160 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	AFP	P02771	609 aa	Known RBP	13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	TMEM191B	P0C7N4	346 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	TRIM49	P0CI25	452 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	TRIM49C	P0CI26	452 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	ATP1A3	P13637	1013 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	HTRA4	P83105	476 aa	Predicted RBP	13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	TFAM	Q00059	246 aa	Known RBP	13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	SHH	Q15465	462 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	NAB2	Q15742	525 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	UVSSA	Q2YD98	709 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	CREBRF	Q8IUR6	639 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	CMTR2	Q8IYT2	770 aa	Known RBP	13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	LRRC43	Q8N309	656 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	BEST2	Q8NFU1	509 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	ANKRD36BP1	Q96IX9	119 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	POP1	Q99575	1024 aa	Known RBP	13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	CXCL16	Q9H2A7	254 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	TMEM8A	Q9HCN3	771 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	MIOS	Q9NXC5	875 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	INPP5F	Q9Y2H2	1132 aa		13.71	□□□□□ -0.21
CDC45-208	ENST00000471470	CEP290	O15078	2479 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	COL4A6	Q14031	1691 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	TBKBP1	A7MCY6	615 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	POMC	P01189	267 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	AFF1	P51825	1210 aa	Known RBP	13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	COPB1	P53618	953 aa	Known RBP	13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	PPP3CA	Q08209	521 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	DSC1	Q08554	894 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	KCNH2	Q12809	1159 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	TUSC3	Q13454	348 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	ZACN	Q401N2	412 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	VWA3B	Q502W6	1294 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	MIIP	Q5JXC2	388 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	GLRA4	Q5JXX5	417 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	KRT39	Q6A163	491 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	C15orf39	Q6ZRI6	1047 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	APTX	Q7Z2E3	356 aa	Known RBP	13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	OR5B17	Q8NGF7	314 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	ZNF516	Q92618	1163 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	UROC1	Q96N76	676 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	YME1L1	Q96TA2	773 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	RAD9A	Q99638	391 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	MTMR12	Q9C0I1	747 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	NDST4	Q9H3R1	872 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	TBC1D13	Q9NVG8	400 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	TAB2	Q9NYJ8	693 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	ITGA11	Q9UKX5	1188 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	PLAGL2	Q9UPG8	496 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	INSL6	Q9Y581	213 aa		13.7	□□□□□ -0.22
CDC45-208	ENST00000471470	GTPBP10	A4D1E9	387 aa	Known RBP	13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	CARNS1	A5YM72	827 aa		13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	SERPINC1	P01008	464 aa		13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	C4BPA	P04003	597 aa	Known RBP	13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	LRPAP1	P30533	357 aa		13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	RPL9	P32969	192 aa	Known RBP	13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	GCLM	P48507	274 aa		13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	FMO5	P49326	533 aa		13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	GATM	P50440	423 aa		13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	MXI1	P50539	228 aa		13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	FANCC	Q00597	558 aa		13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	RNASEL	Q05823	741 aa	Known RBP	13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	CETN1	Q12798	172 aa		13.69	□□□□□ -0.22
CDC45-208	ENST00000471470	FILIP1L	Q4L180	1135 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms